Metamenu

Effective results for Anaerococcus prevotii DSM 20548 (eggnog40)

Summary

Number of putative secreted proteins: 23
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 13 eukaryotic-like domains, contained in 23 proteins (2 high, 21 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525919.Apre_0660(PF16199)ER
525919.Apre_1073(PF11070)ER
525919.Apre_1684(PF01813)mitochondrial
525919.Apre_1275PF02916ER
525919.Apre_1289PF02150(plastid)
525919.Apre_1706(PF01969)
525919.Apre_1707(PF01969)
525919.Apre_1012(PF01991)
525919.Apre_1013(PF01990)
525919.Apre_1015(PF01496)
525919.Apre_1017(PF01992)
525919.Apre_1009(PF01813)
525919.Apre_0445(PF14512)
525919.Apre_1049(PF14512)
525919.Apre_0405(PF12646)
525919.Apre_1011(PF16886)
525919.Apre_0890(PF16199)
525919.Apre_1691(PF01496)
525919.Apre_1689(PF01991)
525919.Apre_1688(PF01992)
525919.Apre_1687(PF01990)
525919.Apre_1686(PF16886)
525919.Apre_1403(PF16199)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================