Effective results for Corynebacterium resistens DSM 45100 (eggnog40)

Summary

Number of putative secreted proteins: 48
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 48 proteins (0 high, 48 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
662755.CRES_1097(PF00438) (PF02773) (PF02772)
662755.CRES_0890(PF00438) (PF02773) (PF02772)
662755.CRES_1691(PF13936)mitochondrial; (mitochondrial)
662755.CRES_1355(PF13936)(mitochondrial)
662755.CRES_1348(PF13518)mitochondrial
662755.CRES_1013(PF13518)mitochondrial
662755.CRES_0141(PF13518)mitochondrial
662755.CRES_1632(PF01195)mitochondrial
662755.CRES_1552(PF00438) (PF02773) (PF02772)
662755.CRES_2084(PF13936)mitochondrial
662755.CRES_1626(PF00872)plastid
662755.CRES_1891(PF00872)plastid
662755.CRES_1480(PF13518)(plastid)
662755.CRES_2096(PF00872)plastid
662755.CRES_0102(PF00872)
662755.CRES_0451(PF00872)
662755.CRES_0100(PF00872)
662755.CRES_0692(PF00872)
662755.CRES_0314(PF13518)
662755.CRES_2035(PF00872)
662755.CRES_0072(PF00872)
662755.CRES_0071(PF00872)
662755.CRES_0077(PF13936)
662755.CRES_0784(PF00872)
662755.CRES_0092(PF13518)
662755.CRES_0325(PF00872)
662755.CRES_0067(PF00872)
662755.CRES_0248(PF13518)
662755.CRES_1692(PF00872)
662755.CRES_2005(PF00872)
662755.CRES_1915(PF00872)
662755.CRES_1353(PF00872)
662755.CRES_0635(PF00872)
662755.CRES_1162(PF00872)
662755.CRES_0622(PF00872)
662755.CRES_0576(PF13936)
662755.CRES_1800(PF13455)
662755.CRES_0614(PF13936)
662755.CRES_1635(PF01195)
662755.CRES_0601(PF13936)
662755.CRES_0600(PF00872)
662755.CRES_1998(PF00872)
662755.CRES_2147(PF00872)
662755.CRES_0705(PF00872)
662755.CRES_0019(PF00872)
662755.CRES_0017(PF00872)
662755.CRES_1191(PF17048)
662755.CRES_1266(PF13936)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================