Metamenu

Effective results for Cellulophaga algicola DSM 14237 (eggnog40)

Summary

Number of putative secreted proteins: 137
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 36 eukaryotic-like domains, contained in 137 proteins (24 high, 113 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
688270.Celal_1916(PF12796)ER
688270.Celal_1910(PF04366)ER
688270.Celal_3696(PF04536)ER
688270.Celal_3697(PF04536)mitochondrial
688270.Celal_1699(PF08239)ER
688270.Celal_1690(PF08239)ER
688270.Celal_1459(PF08239)ER
688270.Celal_2481(PF15902)ER
688270.Celal_2066(PF10988)ER
688270.Celal_3310(PF04536)ER
688270.Celal_0757(PF07593)ER
688270.Celal_2878(PF10988)ER
688270.Celal_4051(PF08239)ER
688270.Celal_1978(PF12158)ER
688270.Celal_2470(PF16757)ER
688270.Celal_1801(PF02230)ER
688270.Celal_0433(PF07593)ER
688270.Celal_1587(PF03321)mitochondrial
688270.Celal_0187(PF04784)ER
688270.Celal_0983(PF07593)mitochondrial
688270.Celal_0984(PF07593)ER
688270.Celal_4045(PF12158)ER
688270.Celal_4048(PF08239)ER
688270.Celal_2469(PF16757)ER
688270.Celal_2460(PF07593)ER
688270.Celal_2466(PF16757)ER
688270.Celal_2916(PF08787)ER
688270.Celal_0280(PF08239)ER
688270.Celal_0778(PF07593)ER
688270.Celal_2459(PF16757)ER
688270.Celal_2635(PF02469)ER
688270.Celal_3431(PF16313)ER
688270.Celal_3092(PF02230)ER
688270.Celal_0947(PF04784)ER
688270.Celal_0940(PF04784)ER
688270.Celal_2710(PF10988)ER
688270.Celal_3375(PF02469)ER
688270.Celal_4012(PF12158)ER
688270.Celal_2384(PF00431)ER
688270.Celal_1700PF01030ER
688270.Celal_3961(PF14240)ER
688270.Celal_3964(PF08787)ER
688270.Celal_2559(PF08239)ER
688270.Celal_2179(PF10988)ER
688270.Celal_0557(PF02843)(mitochondrial)
688270.Celal_0875(PF00560)ER
688270.Celal_0807(PF04536)ER
688270.Celal_1605(PF02469)(ER)
688270.Celal_1602(PF15902)ER
688270.Celal_0936(PF07593)ER
688270.Celal_0935(PF02469)ER
688270.Celal_4031(PF08239)ER
688270.Celal_2985(PF04366)ER
688270.Celal_2185(PF10988)ER
688270.Celal_3580(PF08787)ER
688270.Celal_1473(PF10988)ER
688270.Celal_4077(PF14240)ER
688270.Celal_0458(PF07593)ER
688270.Celal_3252PF01030(mitochondrial)
688270.Celal_4222(PF14592)ER
688270.Celal_1303PF01030ER
688270.Celal_3009(PF12796)ER
688270.Celal_0684(PF08239)ER
688270.Celal_3485(PF13415)ER
688270.Celal_0449(PF04366)ER
688270.Celal_0442(PF14592)ER
688270.Celal_3860(PF02469)ER
688270.Celal_3262(PF04536)ER
688270.Celal_4215(PF08787)ER
688270.Celal_0662(PF12796)ER; (ER)
688270.Celal_0663(PF12796)ER; (ER)
688270.Celal_0660(PF12796)ER; (ER)
688270.Celal_0661(PF12796)ER; (ER)
688270.Celal_0664(PF12796)ER; (ER)
688270.Celal_1247(PF08239)ER
688270.Celal_0787(PF16313)ER
688270.Celal_1659(PF15902)ER
688270.Celal_3874(PF12796)ER
688270.Celal_3871(PF02469)ER
688270.Celal_0877(PF00560)ER
688270.Celal_0876(PF00560)ER
688270.Celal_0659(PF12796)ER; (ER)
688270.Celal_0658(PF12796)ER; (ER)
688270.Celal_2228(PF17032)(mitochondrial)
688270.Celal_2270(PF12796)ER
688270.Celal_4098(PF14240)ER
688270.Celal_3573(PF01679)ER; not used
688270.Celal_0785(PF01679)ER; not used
688270.Celal_0259PF12762
688270.Celal_2485(PF07593)
688270.Celal_1754(PF16313)
688270.Celal_1804(PF03321)
688270.Celal_2124(PF03321)
688270.Celal_2869PF12762
688270.Celal_4042PF12762
688270.Celal_1569(PF02843)
688270.Celal_1366(PF13875)
688270.Celal_0195(PF07766)
688270.Celal_1179(PF12796)
688270.Celal_4062PF12762
688270.Celal_1387PF12762
688270.Celal_2449PF03371
688270.Celal_3397(PF02230)
688270.Celal_2915(PF08787)
688270.Celal_0179(PF15902)
688270.Celal_1449PF12762
688270.Celal_2891PF12762
688270.Celal_3412(PF17032)
688270.Celal_3705PF12762
688270.Celal_0143PF12762
688270.Celal_2953(PF06100)
688270.Celal_2950(PF06100)
688270.Celal_3350PF12762
688270.Celal_3592(PF12796)
688270.Celal_0806(PF04536)
688270.Celal_4256PF12762
688270.Celal_0932(PF00165)
688270.Celal_1466(PF08239)
688270.Celal_3901(PF15891)
688270.Celal_0220PF12762
688270.Celal_0454(PF05153)
688270.Celal_3255(PF16804)
688270.Celal_0688(PF13910)
688270.Celal_3866PF12762
688270.Celal_3264PF12762
688270.Celal_3260(PF08239)
688270.Celal_2239PF12762
688270.Celal_2652PF12762
688270.Celal_3495(PF10504)
688270.Celal_3491(PF10013)not used
688270.Celal_0897PF12762
688270.Celal_2794PF12762
688270.Celal_3464(PF02230)
688270.Celal_3682PF12762
688270.Celal_3204(PF12796)
688270.Celal_0262PF12762
688270.Celal_0860(PF07593)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================