Metamenu

Effective results for Aerococcus urinae ACS-120-V-Col10a (eggnog40)

Summary

Number of putative secreted proteins: 65
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 13 eukaryotic-like domains, contained in 65 proteins (24 high, 41 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
866775.HMPREF9243_0042(PF12821)ER
866775.HMPREF9243_0620(PF05935)ER
866775.HMPREF9243_0755(PF12821)(ER); ER
866775.HMPREF9243_1720(PF12821)ER
866775.HMPREF9243_1435(PF09419)ER; (ER)
866775.HMPREF9243_1404(PF00665) (PF13276)
866775.HMPREF9243_0044(PF00665) (PF13276)
866775.HMPREF9243_0288(PF00665) (PF13276)
866775.HMPREF9243_0335(PF00665) (PF13276)
866775.HMPREF9243_0619(PF00665) (PF13276)
866775.HMPREF9243_1520(PF00665) (PF13276)
866775.HMPREF9243_0854(PF00665) (PF13276)
866775.HMPREF9243_0825(PF01992)(mitochondrial)
866775.HMPREF9243_1837(PF00665) (PF13276)
866775.HMPREF9243_0208(PF00665) (PF13276)
866775.HMPREF9243_1955(PF00665) (PF13276)
866775.HMPREF9243_0579(PF10437)(mitochondrial)
866775.HMPREF9243_0363(PF00665) (PF13276)
866775.HMPREF9243_1796(PF00665) (PF13276)
866775.HMPREF9243_0998(PF00665) (PF13276)
866775.HMPREF9243_1599(PF00665) (PF13276)
866775.HMPREF9243_0404(PF00665) (PF13276)
866775.HMPREF9243_0743(PF00665) (PF13276)
866775.HMPREF9243_0080(PF00665) (PF13276)
866775.HMPREF9243_0265(PF00665) (PF13276)
866775.HMPREF9243_1123(PF00665) (PF13276)
866775.HMPREF9243_0070(PF00665) (PF13276)
866775.HMPREF9243_2020(PF00665) (PF13276)
866775.HMPREF9243_1716(PF10437)
866775.HMPREF9243_1405PF13518
866775.HMPREF9243_0043PF13518
866775.HMPREF9243_0289PF13518
866775.HMPREF9243_0334PF13518
866775.HMPREF9243_0618PF13518
866775.HMPREF9243_1456(PF01496)
866775.HMPREF9243_1452(PF01990)
866775.HMPREF9243_1453(PF01992)
866775.HMPREF9243_1521PF13518
866775.HMPREF9243_0855PF13518
866775.HMPREF9243_1987PF13518
866775.HMPREF9243_1449(PF01813)
866775.HMPREF9243_0822(PF01990)
866775.HMPREF9243_0820(PF16886)
866775.HMPREF9243_0824(PF01496)
866775.HMPREF9243_0630(PF08975)
866775.HMPREF9243_1836PF13518
866775.HMPREF9243_1308PF13518
866775.HMPREF9243_0207PF13518
866775.HMPREF9243_0209PF13518
866775.HMPREF9243_1451(PF16886)
866775.HMPREF9243_1956PF13518
866775.HMPREF9243_0364PF13518
866775.HMPREF9243_0818(PF01813)
866775.HMPREF9243_1158PF13518
866775.HMPREF9243_1775(PF10437)
866775.HMPREF9243_0999PF13518
866775.HMPREF9243_1168PF13518
866775.HMPREF9243_1598PF13518
866775.HMPREF9243_0403PF13518
866775.HMPREF9243_0742PF13518
866775.HMPREF9243_1920PF13518
866775.HMPREF9243_1609(PF05935)
866775.HMPREF9243_0264PF13518
866775.HMPREF9243_2019PF13518
866775.HMPREF9243_1124PF13518

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================