Effective results for Streptococcus oralis ATCC 49296 (eggnog40)

Summary

Number of putative secreted proteins: 97
- Predicted by T4SEpre: 96
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 18 proteins (2 high, 16 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
888049.HMPREF8578_1000+ER
888049.HMPREF8578_1819+ER
888049.HMPREF8578_0569+(mitochondrial)
888049.HMPREF8578_0645(PF00344)mitochondrial
888049.HMPREF8578_1345+ER
888049.HMPREF8578_1909+ER
888049.HMPREF8578_0505+mitochondrial; (mitochondrial)
888049.HMPREF8578_1357+ER
888049.HMPREF8578_1911+(mitochondrial); (plastid)
888049.HMPREF8578_1637+ER
888049.HMPREF8578_1725+ER
888049.HMPREF8578_1938+ER
888049.HMPREF8578_1399+ER
888049.HMPREF8578_1396+ER
888049.HMPREF8578_1395+ER
888049.HMPREF8578_0478(PF05257)ER
888049.HMPREF8578_0851+ER
888049.HMPREF8578_1018(PF05257)mitochondrial
888049.HMPREF8578_1402+(mitochondrial)
888049.HMPREF8578_0442+ER
888049.HMPREF8578_0912(PF00344)(ER)
888049.HMPREF8578_0061(PF03644)mitochondrial
888049.HMPREF8578_1185+ER
888049.HMPREF8578_0453+mitochondrial; (mitochondrial)
888049.HMPREF8578_0832PF02916(mitochondrial)
888049.HMPREF8578_1686(PF04991)(ER)
888049.HMPREF8578_1202+ER
888049.HMPREF8578_1156+ER
888049.HMPREF8578_1505+ER
888049.HMPREF8578_1301+ER
888049.HMPREF8578_0492(PF05257)(ER)
888049.HMPREF8578_0165+(mitochondrial)
888049.HMPREF8578_1956+
888049.HMPREF8578_0750PF04103
888049.HMPREF8578_0208+
888049.HMPREF8578_1567+
888049.HMPREF8578_1561+
888049.HMPREF8578_1374(PF01633)
888049.HMPREF8578_1593+
888049.HMPREF8578_0221+
888049.HMPREF8578_0644+
888049.HMPREF8578_0649+
888049.HMPREF8578_0775(PF05257)
888049.HMPREF8578_0728+
888049.HMPREF8578_1124(PF01633)
888049.HMPREF8578_1129+
888049.HMPREF8578_0656+
888049.HMPREF8578_1286+
888049.HMPREF8578_0392+
888049.HMPREF8578_0246(PF00847)
888049.HMPREF8578_1389+
888049.HMPREF8578_0348(PF03596)
888049.HMPREF8578_0893+
888049.HMPREF8578_1065+
888049.HMPREF8578_0606+
888049.HMPREF8578_0604+
888049.HMPREF8578_0268+
888049.HMPREF8578_0966+
888049.HMPREF8578_0077+
888049.HMPREF8578_0473+
888049.HMPREF8578_0611+
888049.HMPREF8578_0617+
888049.HMPREF8578_0109+
888049.HMPREF8578_1425+
888049.HMPREF8578_1082+
888049.HMPREF8578_1884+
888049.HMPREF8578_1663+
888049.HMPREF8578_1669+
888049.HMPREF8578_0130+
888049.HMPREF8578_0821+
888049.HMPREF8578_0013+
888049.HMPREF8578_1513+
888049.HMPREF8578_1050+
888049.HMPREF8578_1504+
888049.HMPREF8578_0455+
888049.HMPREF8578_0839(PF04991)
888049.HMPREF8578_0214+
888049.HMPREF8578_1261+
888049.HMPREF8578_1861+
888049.HMPREF8578_1190+
888049.HMPREF8578_0480+
888049.HMPREF8578_1684(PF04991)
888049.HMPREF8578_1683(PF04991)
888049.HMPREF8578_1853+
888049.HMPREF8578_1855+
888049.HMPREF8578_0664+
888049.HMPREF8578_0921+
888049.HMPREF8578_0141+
888049.HMPREF8578_1775+
888049.HMPREF8578_1844(PF03596)
888049.HMPREF8578_0953+
888049.HMPREF8578_0778+
888049.HMPREF8578_0178+
888049.HMPREF8578_0015+
888049.HMPREF8578_0014+
888049.HMPREF8578_0782+
888049.HMPREF8578_0301+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================