Effective results for Staphylococcus aureus subsp. aureus NCTC 8325 (eggnog40)

Summary

Number of putative secreted proteins: 25
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 8 eukaryotic-like domains, contained in 25 proteins (15 high, 10 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
93061.SAOUHSC_02979PF05257ER
93061.SAOUHSC_02491(PF00344)(mitochondrial)
93061.SAOUHSC_02855PF05257ER
93061.SAOUHSC_00773PF05257ER
93061.SAOUHSC_02989(PF00344)(mitochondrial)
93061.SAOUHSC_00256PF05257ER
93061.SAOUHSC_02656(PF11070)ER
93061.SAOUHSC_02921(PF03306)ER
93061.SAOUHSC_02576PF05257(mitochondrial)
93061.SAOUHSC_00427PF05257(ER)
93061.SAOUHSC_02173PF05257(mitochondrial)
93061.SAOUHSC_02467(PF03306)(ER)
93061.SAOUHSC_02883PF05257(ER)
93061.SAOUHSC_00671PF05257(mitochondrial)
93061.SAOUHSC_01725(PF03054)
93061.SAOUHSC_02571PF05257
93061.SAOUHSC_02371(PF03630)
93061.SAOUHSC_02393PF02037
93061.SAOUHSC_01726(PF03054)
93061.SAOUHSC_00375(PF03054)
93061.SAOUHSC_02019PF05257
93061.SAOUHSC_02023PF05257
93061.SAOUHSC_00751(PF05495)
93061.SAOUHSC_01219PF05257
93061.SAOUHSC_01515PF05257

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================