Metamenu

Genomes encoding eukaryotic-like proteins

PF00686 Starch binding domain

Copy number in non-pathogens:
Mean=0.14 Stddev=0.40

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bifidobacterium pseudocatenulatum s 4 2
Bifidobacterium angulatum DSM 20098 = JCM 7096 s 4 2
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 s 4 2
Paenibacillus riograndensis SBR5 s 7 3
Bifidobacterium angulatum DSM 20098 = JCM 7096 s 4 2
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 s 4 2
Prevotella copri DSM 18205 s 4 2
Prevotella oralis ATCC 33269 s 4 2
Prevotella dentalis DSM 3688 s 4 2
Bacteroides salanitronis DSM 18170 s 4 2
Prevotella oralis CC98A s 4 2
Alistipes finegoldii DSM 17242 s 4 2
Prevotella dentalis DSM 3688 s 4 2
Stigmatella aurantiaca DW4/3-1 s 7 3
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 s 4 2
Paenibacillus sonchi X19-5 s 7 3
Hallella seregens ATCC 51272 s 4 2
Bacillus flexus T6186-2 s 4 2
Prevotella sp. oral taxon 317 str. F0108 s 4 2
Prevotella oralis HGA0225 s 4 2
Nostoc punctiforme PCC 73102 s 4 2
Stigmatella aurantiaca DW4/3-1 s 7 3
Prevotella ruminicola 23 s 4 2
Streptomyces avicenniae s 4 2
Actinoplanes subtropicus s 4 2
Bifidobacterium angulatum s 4 2
Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 s 4 2
Prevotella sp. FD3004 s 4 2
Prevotella ruminicola s 4 2
Prevotella sp. MA2016 s 4 2
Prevotella oryzae DSM 17970 s 4 2
Clostridium botulinum s 7 3
Clostridium botulinum s 4 2
Myxosarcina sp. GI1 s 4 2
Bifidobacterium angulatum s 4 2
Clostridium botulinum s 7 3
Paenibacillus jilunlii s 4 2
Nostoc sp. KVJ20 s 4 2
Prevotella ruminicola s 4 2
Prevotella ruminicola s 4 2
Paenibacillus jilunlii s 4 2
Prevotella ruminicola s 4 2
Prevotella ruminicola s 7 3
Prevotella oralis s 4 2
Stigmatella aurantiaca s 7 3
Clostridium taeniosporum s 7 3
Bifidobacterium pseudocatenulatum s 4 2

*p=pathogen;s=symbiont