Genomes encoding eukaryotic-like proteins

PF01813 ATP synthase subunit D

Copy number in non-pathogens:
Mean=0.09 Stddev=0.32

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Treponema saccharophilum DSM 2985 s 5 2
Treponema sp. JC4 s 5 2
Treponema pallidum subsp. pallidum str. Chicago s 5 2
Peptostreptococcaceae bacterium OBRC8 s 5 2
Treponema pallidum subsp. pallidum str. Mexico A s 5 2
Finegoldia magna SY403409CC001050417 s 5 2
Clostridium sp. ASF502 s 5 2
Blautia producta ATCC 27340 = DSM 2950 s 5 2
Peptoniphilus lacrimalis DSM 7455 s 5 2
Anaerococcus senegalensis JC48 s 5 2
Peptoniphilus senegalensis JC140 s 5 2
Anaerococcus sp. PH9 s 5 2
Peptoniphilus grossensis ph5 s 5 2
Peptoniphilus obesi ph1 s 5 2
Peptoniphilus timonensis JC401 s 5 2
Aerococcus viridans LL1 s 5 2
Treponema pallidum str. Fribourg-Blanc s 5 2
[Clostridium] bolteae 90B7 s 5 2
[Clostridium] bolteae 90B8 s 5 2
[Clostridium] bolteae 90A9 s 5 2
[Clostridium] bolteae 90A5 s 5 2
[Clostridium] bolteae 90B3 s 5 2
[Clostridium] clostridioforme 90A6 s 5 2
[Clostridium] clostridioforme 90A4 s 5 2
[Clostridium] clostridioforme 90A7 s 5 2
[Clostridium] clostridioforme 90B1 s 5 2
[Clostridium] clostridioforme 90A1 s 5 2
[Clostridium] clostridioforme 90A3 s 5 2
[Clostridium] clostridioforme 90A8 s 5 2
[Clostridium] clostridioforme CM201 s 5 2
Enterococcus flavescens ATCC 49996 s 5 2
Treponema pallidum subsp. pallidum str. Nichols s 5 2
Treponema socranskii subsp. paredis ATCC 35535 s 5 2
Treponema maltophilum ATCC 51939 s 5 2
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 s 5 2
Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 s 5 2
[Clostridium] symbiosum ATCC 14940 s 5 2
Blautia sp. KLE 1732 s 5 2
Clostridium sp. ATCC 29733 s 5 2
Treponema lecithinolyticum ATCC 700332 s 5 2
Peptoniphilus sp. ChDC B134 s 5 2
Enterococcus casseliflavus NBRC 100478 s 5 2
Enterococcus gallinarum NBRC 100675 s 5 2
Aerococcus urinae NBRC 15544 = CCUG 36881 s 5 2
Streptococcus pneumoniae s 5 2
Streptococcus pneumoniae s 5 2
Streptococcus pneumoniae s 5 2
Acholeplasma oculi s 5 2
bacterium MS4 s 5 2
Clostridium sp. LF2 s 5 2
bacterium MS4 s 5 2
Clostridium sp. LF2 s 5 2
Treponema phagedenis s 5 2
Anaerococcus sp. MT16 s 5 2
Ruminococcaceae bacterium GD6 s 5 2
Ruminococcus sp. AT10 s 5 2
Blautia sp. GD9 s 5 2
Anaerobaculum hydrogeniformans ATCC BAA-1850 s 9 3
Dorea sp. D27 s 5 2
Clostridium orbiscindens 1_3_50AFAA s 9 3
[Clostridium] bolteae WAL-14578 s 5 2
[Clostridium] clostridioforme WAL-7855 s 5 2
[Clostridium] citroniae WAL-19142 s 5 2
Enterococcus flavescens ATCC 49996 s 5 2
Treponema phagedenis 4A s 5 2
Marichromatium purpuratum 984 s 5 2
Treponema pedis str. T M1 s 5 2
Treponema pedis str. B 683 s 5 2
Treponema pedis isoE1186 s 5 2
Treponema pedis isoM1220 s 5 2
Treponema pedis isoM1224 s 5 2
Clostridium sp. ATCC BAA-442 s 5 2
Blautia producta ATCC 27340 = DSM 2950 s 5 2
Aerococcus urinaeequi DSM 20341 = CCUG 28094 s 5 2
Atopococcus tabaci DSM 17538 s 5 2
Ruminococcus gauvreauii DSM 19829 s 5 2
Parvimonas micra A293 s 5 2
Acholeplasma granularum ATCC 19168 s 5 2
Ruminococcus gnavus AGR2154 s 5 2
Finegoldia magna ALB8 s 5 2
Synergistes jonesii s 5 2
Enterococcus gallinarum s 5 2
Enterococcus gallinarum s 5 2
Blautia schinkii DSM 10518 s 5 2
Clostridium algidicarnis s 5 2
Tissierellia bacterium S5-A11 s 5 2
Clostridium lundense DSM 17049 s 5 2
Clostridium tetani s 5 2
Clostridium tetani ATCC 9441 s 5 2
Clostridium tetani s 5 2
Clostridium tetani s 5 2
Aerococcus christensenii DSM 15819 = CCUG 28831 s 5 2
Parvimonas micra s 5 2
Clostridium tetani s 5 2
Clostridium tetani s 5 2
Clostridium tetani s 5 2
Eubacterium limosum s 5 2
Eubacterium limosum s 5 2
Clostridium tetani ATCC 454 s 5 2
Anaerococcus tetradius s 5 2
Finegoldia magna s 5 2
Peptoniphilus harei s 5 2
Enterococcus gallinarum s 5 2
Oxobacter pfennigii s 9 3
Peptoniphilus sp. BV3AC2 s 5 2
Ruminococcus gnavus CC55_001C s 5 2
Peptoniphilus lacrimalis 315-B s 5 2
Aerococcus viridans ATCC 11563 = CCUG 4311 s 5 2
Peptoniphilus sp. oral taxon 386 str. F0131 s 5 2
Peptoniphilus sp. oral taxon 836 str. F0141 s 5 2
Finegoldia magna ACS-171-V-Col3 s 5 2
Finegoldia magna BVS033A4 s 5 2
Peptoniphilus duerdenii ATCC BAA-1640 s 5 2
[Eubacterium] yurii subsp. margaretiae ATCC 43715 s 5 2
Ruminococcus torques ATCC 27756 s 5 2
Dorea formicigenerans ATCC 27755 s 5 2
Dorea longicatena DSM 13814 s 5 2
Eubacterium ventriosum ATCC 27560 s 5 2
[Clostridium] bolteae ATCC BAA-613 s 5 2
Parvimonas micra ATCC 33270 s 5 2
Pseudoflavonifractor capillosus ATCC 29799 s 5 2
[Clostridium] scindens ATCC 35704 s 5 2
Ruminococcus gnavus ATCC 29149 s 5 2
Anaerotruncus colihominis DSM 17241 s 5 2
[Clostridium asparagiforme] DSM 15981 s 5 2
Blautia hansenii DSM 20583 s 5 2
Clostridiales bacterium 1_7_47FAA s 5 2
[Clostridium] hylemonae DSM 15053 s 5 2
Anaerococcus lactolyticus ATCC 51172 s 5 2
Anaerococcus tetradius ATCC 35098 s 5 2
Enterococcus casseliflavus EC30 s 5 2
Enterococcus gallinarum EG2 s 5 2
Enterococcus casseliflavus EC10 s 5 2
Anaerococcus vaginalis ATCC 51170 s 5 2
Treponema pallidum subsp. pallidum str. Nichols s 5 2
Clostridium tetani E88 s 5 2
Finegoldia magna ATCC 29328 s 5 2
Anaerococcus prevotii DSM 20548 s 5 2
Finegoldia magna ATCC 53516 s 5 2
Peptoniphilus harei ACS-146-V-Sch2b s 5 2
Lachnospiraceae bacterium 8_1_57FAA s 5 2
Treponema phagedenis F0421 s 5 2
[Clostridium] symbiosum WAL-14163 s 5 2
[Clostridium] symbiosum WAL-14673 s 5 2
Clostridium sp. D5 s 5 2
Enterococcus casseliflavus ATCC 12755 s 5 2
Anaerococcus hydrogenalis ACS-025-V-Sch4 s 5 2
Aerococcus urinae ACS-120-V-Col10a s 5 2
Lachnospiraceae bacterium 6_1_63FAA s 5 2
Lachnospiraceae bacterium 3_1_46FAA s 5 2
Treponema brennaborense DSM 12168 s 5 2
Treponema azotonutricium ZAS-9 s 5 2
Treponema primitia ZAS-2 s 5 2
Parvimonas sp. oral taxon 110 str. F0139 s 5 2
Lachnospiraceae bacterium 5_1_57FAA s 5 2
Lachnospiraceae bacterium 2_1_58FAA s 5 2
Lachnospiraceae bacterium 1_4_56FAA s 5 2
Treponema paraluiscuniculi Cuniculi A s 5 2
Peptoniphilus sp. oral taxon 375 str. F0436 s 5 2
Parvimonas sp. oral taxon 393 str. F0440 s 5 2
endosymbiont of Tevnia jerichonana (vent Tica) s 5 2
endosymbiont of Riftia pachyptila (vent Ph05) s 5 2
Dorea formicigenerans 4_6_53AFAA s 5 2
Peptoniphilus indolicus ATCC 29427 s 5 2
Clostridium sp. 7_3_54FAA s 5 2
[Clostridium] citroniae WAL-17108 s 5 2
Enterococcus saccharolyticus 30_1 s 5 2
[Clostridium] clostridioforme 2_1_49FAA s 5 2
Peptostreptococcaceae bacterium CM5 s 5 2
Peptostreptococcaceae bacterium CM2 s 5 2
Peptostreptococcaceae bacterium ACC19a s 5 2
Synergistes sp. 3_1_syn1 s 5 2
Flavonifractor plautii ATCC 29863 s 5 2
Lachnospiraceae bacterium 7_1_58FAA s 5 2
Treponema pallidum subsp. pertenue str. CDC2 s 5 2
Treponema pallidum subsp. pallidum DAL-1 s 5 2
Treponema pallidum subsp. pertenue str. Gauthier s 5 2
Treponema pallidum subsp. pertenue str. SamoaD s 5 2

*p=pathogen;s=symbiont