Genomes encoding eukaryotic-like proteins
PF03120 NAD-dependent DNA ligase OB-fold domain
Copy number in non-pathogens:
Mean=1.10 Stddev=0.39
Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):
| Genome | Class* | ELD score | Number of proteins containing this domain |
|---|---|---|---|
| Pseudomonas monteilii NBRC 103158 = DSM 14164 | s | 4 | 3 |
| Blautia hansenii DSM 20583 | s | 4 | 3 |
| Pseudoflavonifractor capillosus ATCC 29799 | s | 4 | 3 |
| Ruminococcus gnavus ATCC 29149 | s | 4 | 3 |
| Lachnospiraceae bacterium A4 | s | 4 | 3 |
| Lachnospiraceae bacterium M18-1 | s | 7 | 4 |
| Eubacterium plexicaudatum ASF492 | s | 4 | 3 |
| Pseudomonas monteilii NBRC 103158 = DSM 14164 | s | 4 | 3 |
| Shigella boydii | s | 4 | 3 |
| Ruthenibacterium lactatiformans | s | 4 | 3 |
| Streptomyces scabiei | s | 7 | 4 |
| Opitutaceae bacterium TSB47 | s | 4 | 3 |
| Pseudomonas putida | s | 4 | 3 |
| Escherichia coli | s | 4 | 3 |
| Streptomyces scabiei | s | 4 | 3 |
| Streptomyces scabiei | s | 4 | 3 |
*p=pathogen;s=symbiont
Release announcements
News
Latest publications
Contact
- +43 1 4277 76681
- +43 1 4277 876681
- contact.cube@univie.ac.at
