Genomes encoding eukaryotic-like proteins

PF07470 Glycosyl Hydrolase Family 88

Copy number in non-pathogens:
Mean=0.52 Stddev=1.62

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides reticulotermitis JCM 10512 s 5 9
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 6 11
Bacteroides gallinarum DSM 18171 = JCM 13658 s 4 8
Bacillus trypoxylicola NBRC 102646 s 4 8
Alistipes timonensis JC136 s 5 10
Alistipes senegalensis JC50 s 5 10
Bacteroides xylanisolvens SD CC 1b s 7 13
Bacteroides xylanisolvens SD CC 2a s 7 13
Bacillus dielmoensis s 5 9
Bacteroides thetaiotaomicron s 6 11
Paenibacillus riograndensis SBR5 s 5 9
Bacteroides thetaiotaomicron s 7 12
Bacteroides thetaiotaomicron s 6 11
Bacteroides vulgatus s 6 11
Bacteroides thetaiotaomicron s 6 11
Bacteroides vulgatus s 5 9
Bacteroides thetaiotaomicron s 5 9
Bacteroides ovatus s 11 19
Bacteroides vulgatus s 5 10
Bacteroides thetaiotaomicron s 5 10
Bacteroides stercoris ATCC 43183 s 4 8
Bacteroides intestinalis DSM 17393 s 15 25
Bacteroides plebeius DSM 17135 s 5 10
Bacteroides dorei DSM 17855 s 6 11
Paenibacillus sp. JDR-2 s 6 11
Bacteroides eggerthii DSM 20697 s 6 11
Bacteroides xylanisolvens SD CC 1b s 7 12
Bacteroides vulgatus PC510 s 7 12
Bacteroides xylanisolvens SD CC 2a s 7 12
Bacteroides ovatus SD CMC 3f s 7 13
Bacteroides cellulosilyticus DSM 14838 s 13 23
Bacteroides finegoldii DSM 17565 s 5 9
Hungatella hathewayi DSM 13479 s 7 13
Parabacteroides johnsonii DSM 18315 s 4 8
Bacteroides sp. 3_1_13 s 7 12
Bacteroides clarus YIT 12056 s 9 16
Bacteroides fluxus YIT 12057 s 7 12
Paenibacillus sp. HGF5 s 7 13
Bacteroides caccae ATCC 43185 s 6 11
Parabacteroides merdae ATCC 43184 s 4 8
Bacteroides ovatus ATCC 8483 s 10 17
Parabacteroides sp. ASF519 s 4 8
Clostridium sp. KLE 1755 s 5 10
Bacteroides cellulosilyticus WH2 s 16 28
Paenibacillus massiliensis 2301065 = DSM 16942 s 5 10
Runella zeae DSM 19591 s 4 8
Dysgonomonas capnocytophagoides DSM 22835 s 5 10
Bacteroides gallinarum DSM 18171 = JCM 13658 s 5 9
Echinicola pacifica DSM 19836 s 8 15
Bacteroides sp. 1_1_6 s 5 10
Bacteroides sp. 2_2_4 s 9 16
Bacteroides sp. 4_3_47FAA s 5 10
Bacteroides sp. 9_1_42FAA s 8 14
Bacteroides sp. D1 s 7 12
Bacteroides sp. D2 s 10 17
Bacteroides dorei 5_1_36/D4 s 7 13
Bacteroides sp. 2_1_22 s 7 12
Bacteroides sp. 3_1_33FAA s 7 12
Bacteroides sp. 3_1_23 s 8 14
Bacteroides sp. 3_1_40A s 5 9
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 5 9
Bacteroides ovatus 3_8_47FAA s 11 20
Bacteroides sp. D22 s 9 16
Bacteroides sp. 1_1_30 s 8 14
Bacteroides oleiciplenus YIT 12058 s 16 27
Hungatella hathewayi WAL-18680 s 5 9
Dysgonomonas gadei ATCC BAA-286 s 4 8
Bacteroides caccae CL03T12C61 s 6 11
Bacteroides cellulosilyticus CL02T12C19 s 14 24
Bacteroides dorei CL02T00C15 s 7 13
Bacteroides dorei CL02T12C06 s 7 13
Bacteroides dorei CL03T12C01 s 8 14
Bacteroides nordii CL02T12C05 s 12 21
Bacteroides ovatus CL02T12C04 s 11 19
Bacteroides ovatus CL03T12C18 s 10 18
Bacteroides salyersiae CL02T12C01 s 7 12
Bacteroides vulgatus CL09T03C04 s 7 12
Bacteroides xylanisolvens CL03T12C04 s 8 15
Parabacteroides goldsteinii CL02T12C30 s 4 8
Parabacteroides johnsonii CL02T12C29 s 5 9
Parabacteroides merdae CL03T12C32 s 5 9
Parabacteroides merdae CL09T00C40 s 4 8
Paenibacillus sonchi X19-5 s 5 10
Bacteroides faecis MAJ27 s 6 11
Bacteroides sp. HPS0048 s 11 19
Hungatella hathewayi 12489931 s 13 22
Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 s 7 13
Paenibacillus mucilaginosus 3016 s 8 15
Bacteroides vulgatus ATCC 8482 s 7 12
Pedobacter glucosidilyticus s 5 9
Saccharibacillus sacchari DSM 19268 s 5 9
Bacteroides thetaiotaomicron s 7 12
Paenibacillus odorifer s 7 12
Bacteroides thetaiotaomicron s 6 11
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 5 10
Bacteroides ovatus s 11 20
Bacteroides dorei CL03T12C01 s 8 14
Bacteroides ovatus s 11 20
Bacteroides thetaiotaomicron s 7 12
Bacteroides caecimuris s 5 9
Bacteroides ovatus s 7 13
Paenibacillus jilunlii s 4 8
Bacteroides vulgatus s 5 9
Bacteroides thetaiotaomicron s 5 10
Opitutaceae bacterium TSB47 s 14 24
Bacteroides vulgatus s 5 9
Bacteroides xylanisolvens s 10 17
Bacteroides caecimuris s 6 11
Lachnoclostridium sp. YL32 s 4 8
Bacteroides ovatus s 11 19
Bacteroides ovatus s 9 16
Paenibacillus jilunlii s 4 8
Bacteroides xylanisolvens s 10 17
Alistipes timonensis JC136 s 5 10
Bacteroides ovatus s 11 20
Bacteroides clarus YIT 12056 s 9 16
Bacteroides faecis MAJ27 s 6 11
Eisenbergiella tayi s 5 9
Eisenbergiella tayi s 4 8
Eisenbergiella tayi s 5 10
Eisenbergiella tayi s 4 8
Eisenbergiella tayi s 4 8
Eisenbergiella tayi s 4 8
Eisenbergiella tayi s 4 8
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 6 11
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 13
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 5 10
Paenibacillus odorifer s 5 10
Bacteroides thetaiotaomicron s 5 10
Paenibacillus odorifer s 7 12
Paenibacillus odorifer s 7 12
Eisenbergiella tayi s 5 10
Sphingobacterium sp. B29 s 5 9
Bacteroides xylanisolvens s 7 13
Bacteroides xylanisolvens s 8 14
Bacteroides dorei s 6 11
Bacteroides ovatus s 10 18
Bacteroides dorei s 5 10
Bacteroides thetaiotaomicron VPI-5482 s 6 11

*p=pathogen;s=symbiont