Genomes encoding eukaryotic-like proteins

PF07940 Heparinase II/III-like protein

Copy number in non-pathogens:
Mean=0.47 Stddev=1.08

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Paenibacillus senegalensis JC66 s 7 9
Alistipes timonensis JC136 s 6 8
Bacteroides nordii CL02T12C05 s 6 8
Parabacteroides goldsteinii CL02T12C30 s 7 9
Bacteroides xylanisolvens CL03T12C04 s 10 12
Bacteroides cellulosilyticus CL02T12C19 s 6 7
Bacteroides ovatus CL02T12C04 s 9 11
Bacteroides ovatus CL03T12C18 s 9 11
Parabacteroides merdae CL03T12C32 s 4 5
Parabacteroides merdae CL09T00C40 s 4 5
Bacteroides oleiciplenus YIT 12058 s 6 7
Echinicola pacifica DSM 19836 s 7 9
Bacteroides gallinarum DSM 18171 = JCM 13658 s 11 13
Alistipes senegalensis JC50 s 5 6
Parabacteroides sp. ASF519 s 6 7
Bacteroides stercoris CC31F s 10 12
Bacteroides nordii WAL 11050 = JCM 12987 s 4 5
Bacteroides gallinarum DSM 18171 = JCM 13658 s 5 6
Candidatus Bacteroides timonensis AP1 s 5 6
Bacteroides xylanisolvens SD CC 1b s 8 10
Bacteroides xylanisolvens SD CC 2a s 8 10
Bacteroides thetaiotaomicron s 5 6
Bacteroides sp. 3_1_13 s 8 10
Vibrio sp. HENC-03 s 4 5
Clostridium sp. KLE 1755 s 4 5
Runella zeae DSM 19591 s 4 5
Paenibacillus odorifer s 4 5
Bacteroides thetaiotaomicron s 4 5
Bacteroides ovatus s 9 11
Bacteroides ovatus s 8 10
Bacteroides thetaiotaomicron s 5 6
Bacteroides ovatus s 8 10
Bacteroides thetaiotaomicron s 4 5
Bacteroides sp. 2_1_22 s 8 10
Bacteroides ovatus SD CMC 3f s 8 10
Bacteroides xylanisolvens SD CC 2a s 8 10
Bacteroides xylanisolvens SD CC 1b s 8 10
Bacteroides sp. D22 s 7 9
Bacteroides sp. 3_1_23 s 9 11
Bacteroides caccae ATCC 43185 s 4 5
Bacteroides ovatus ATCC 8483 s 8 10
Parabacteroides merdae ATCC 43184 s 4 5
Diplosphaera colitermitum TAV2 s 24 27
Bacteroides stercoris ATCC 43183 s 10 12
Bacteroides intestinalis DSM 17393 s 7 9
Bacteroides finegoldii DSM 17565 s 7 9
Bacteroides eggerthii DSM 20697 s 14 16
Bacteroides sp. 1_1_6 s 4 5
Bacteroides sp. 2_2_4 s 8 10
Bacteroides sp. D1 s 8 10
Bacteroides sp. D2 s 9 11
Bacteroides thetaiotaomicron VPI-5482 s 4 5
Paenibacillus sp. HGF5 s 4 5
Bacteroides clarus YIT 12056 s 10 12
Bacteroides fluxus YIT 12057 s 5 6
Bacteroides coprosuis DSM 18011 s 4 5
Bacteroides sp. 1_1_30 s 9 11
Bacteroides ovatus 3_8_47FAA s 10 12
Cyclobacterium marinum DSM 745 s 6 8
Opitutaceae bacterium TAV1 s 40 44
Bacteroides faecis MAJ27 s 5 6

*p=pathogen;s=symbiont