Genomes encoding eukaryotic-like proteins

PF13495 Phage integrase, N-terminal SAM-like domain

Copy number in non-pathogens:
Mean=0.46 Stddev=0.90

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Erwinia pyrifoliae DSM 12163 s 6 6
Erwinia sp. Ejp617 s 7 7
Parabacteroides sp. D25 s 9 9
Bacteroides xylanisolvens CL03T12C04 s 9 9
Bacteroides caccae CL03T12C61 s 6 6
Bacteroides fragilis CL03T00C08 s 6 6
Bacteroides fragilis CL03T12C07 s 6 6
Bacteroides ovatus CL02T12C04 s 10 10
Bacteroides ovatus CL03T12C18 s 8 8
Bacteroides uniformis CL03T00C23 s 7 7
Bacteroides uniformis CL03T12C37 s 7 7
Parabacteroides distasonis CL03T12C09 s 11 11
Parabacteroides distasonis CL09T03C24 s 9 9
Rhodopirellula baltica SWK14 s 7 7
Clostridium sp. ASF502 s 7 7
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 5 5
Bacteroides gallinarum DSM 18171 = JCM 13658 s 5 5
Calothrix sp. PCC 7103 s 6 6
Bacillus massilioanorexius AP8 s 6 6
[Clostridium] bolteae 90B8 s 5 5
[Clostridium] clostridioforme 90A6 s 6 6
[Clostridium] clostridioforme 90A4 s 7 7
[Clostridium] clostridioforme 90A1 s 8 8
[Clostridium] clostridioforme 90A8 s 8 8
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 5 5
Paraburkholderia mimosarum LMG 23256 = NBRC 106338 s 5 5
Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 s 5 5
Candidatus Bacteroides timonensis AP1 s 5 5
Bacteroides xylanisolvens SD CC 1b s 10 10
Bacteroides xylanisolvens SD CC 2a s 10 10
Bacteroides thetaiotaomicron s 12 12
Parabacteroides distasonis s 11 11
Bacteroides sp. 3_1_13 s 7 7
Parabacteroides sp. D26 s 10 10
[Clostridium] citroniae WAL-19142 s 5 5
Bacteroides fragilis str. S24L15 s 5 5
Bacteroides fragilis str. S24L26 s 6 6
Bacteroides fragilis str. S24L34 s 6 6
Bacteroides fragilis str. S36L5 s 5 5
Bacteroides fragilis str. S36L11 s 5 5
Bacteroides fragilis str. S36L12 s 5 5
Parabacteroides sp. 2_1_7 s 10 10
Lysinibacillus sphaericus s 5 5
Bacteroides fragilis s 6 6
Bacillus cereus s 6 6
Myxosarcina sp. GI1 s 11 11
Bacteroides thetaiotaomicron s 10 10
Parabacteroides gordonii MS-1 s 8 8
Bacteroides ovatus s 8 8
Clostridium botulinum s 5 5
Bacillus cereus s 5 5
Bacteroides ovatus s 9 9
Bacteroides thetaiotaomicron s 7 7
Bacteroides ovatus s 8 8
Lysinibacillus sphaericus s 5 5
Colwellia sp. MT41 s 10 10
Bacteroides thetaiotaomicron s 5 5
Lysinibacillus sphaericus s 5 5
Lysinibacillus sphaericus s 5 5
Lysinibacillus sphaericus s 5 5
Fusobacterium necrophorum subsp. funduliforme s 6 6
Bacillus simplex s 5 5
Erwinia pyrifoliae Ep1/96 s 6 6
Bacteroides sp. 2_1_33B s 7 7
Bacteroides sp. 2_1_22 s 8 8
Bacteroides ovatus SD CMC 3f s 9 9
Bacteroides xylanisolvens SD CC 2a s 8 8
Bacteroides xylanisolvens SD CC 1b s 10 10
Bacteroides sp. 3_1_19 s 9 9
Bacteroides sp. D22 s 9 9
Bacteroides sp. 3_1_23 s 9 9
Parabacteroides sp. 20_3 s 12 12
Bacteroides caccae ATCC 43185 s 7 7
Bacteroides ovatus ATCC 8483 s 9 9
Bacteroides uniformis ATCC 8492 s 6 6
Bacteroides finegoldii DSM 17565 s 5 5
Tyzzerella nexilis DSM 1787 s 5 5
[Clostridium asparagiforme] DSM 15981 s 5 5
Bacteroides sp. 1_1_6 s 7 7
Bacteroides sp. 2_2_4 s 11 11
Bacteroides sp. D1 s 9 9
Bacteroides sp. D2 s 7 7
Fusobacterium gonidiaformans 3-1-5R s 5 5
Parabacteroides sp. D13 s 8 8
Nostoc punctiforme PCC 73102 s 5 5
Acaryochloris marina MBIC11017 s 9 9
Parabacteroides distasonis ATCC 8503 s 9 9
Sinorhizobium fredii NGR234 s 11 11
Bacteroides sp. 4_1_36 s 6 6
Bacteroides thetaiotaomicron VPI-5482 s 7 7
Bacteroides sp. 1_1_30 s 9 9
Bacteroides ovatus 3_8_47FAA s 11 11
[Clostridium] clostridioforme 2_1_49FAA s 6 6
Bacteroides fragilis 638R s 5 5
Bacteroides faecis MAJ27 s 11 11

*p=pathogen;s=symbiont