Metamenu

Effective results for Faecalibacterium prausnitzii A2-165 (eggnog40)

Summary

Number of putative secreted proteins: 130
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 22 eukaryotic-like domains, contained in 130 proteins (38 high, 92 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
411483.FAEPRAA2165_00570PF01131 (PF01751)(ER); mitochondrial
411483.FAEPRAA2165_03153PF01131 (PF01751)mitochondrial; (mitochondrial)
411483.FAEPRAA2165_03511(PF03577)(mitochondrial)
411483.FAEPRAA2165_02008PF03432(mitochondrial); mitochondrial
411483.FAEPRAA2165_01945(PF01554)(ER)
411483.FAEPRAA2165_00560PF03432mitochondrial
411483.FAEPRAA2165_02859(PF01554)ER
411483.FAEPRAA2165_00893PF03432(mitochondrial)
411483.FAEPRAA2165_01235(PF01554)ER
411483.FAEPRAA2165_00659(PF03577)(mitochondrial)
411483.FAEPRAA2165_01311(PF01554)(ER)
411483.FAEPRAA2165_01074(PF01554)(ER)
411483.FAEPRAA2165_03522(PF01554)(ER); ER
411483.FAEPRAA2165_03328(PF00239)(mitochondrial)
411483.FAEPRAA2165_02957PF01131 (PF01751)
411483.FAEPRAA2165_02381(PF05697) PF05698
411483.FAEPRAA2165_02713PF01131 (PF01751)
411483.FAEPRAA2165_01436(PF00239)(mitochondrial)
411483.FAEPRAA2165_00701(PF01554)(ER)
411483.FAEPRAA2165_03148PF01131 (PF01751)
411483.FAEPRAA2165_00583PF01807(ER)
411483.FAEPRAA2165_02885PF16994(mitochondrial)
411483.FAEPRAA2165_02075(PF00239)(mitochondrial)
411483.FAEPRAA2165_03200(PF01554)(ER)
411483.FAEPRAA2165_00871PF01131 (PF01751)
411483.FAEPRAA2165_00063PF01131 (PF01751)
411483.FAEPRAA2165_00211(PF05697) PF05698
411483.FAEPRAA2165_00882PF01807
411483.FAEPRAA2165_02110PF01131
411483.FAEPRAA2165_02118PF03432
411483.FAEPRAA2165_01472PF03432
411483.FAEPRAA2165_01292(PF01554)
411483.FAEPRAA2165_01294(PF01554)
411483.FAEPRAA2165_01764(PF04794)
411483.FAEPRAA2165_03298PF03432
411483.FAEPRAA2165_02109(PF01751)
411483.FAEPRAA2165_02564(PF00239)
411483.FAEPRAA2165_01288(PF04961)not used
411483.FAEPRAA2165_01287(PF04961)
411483.FAEPRAA2165_03510(PF03577)not used
411483.FAEPRAA2165_00081PF03432
411483.FAEPRAA2165_03280(PF00239)
411483.FAEPRAA2165_00885PF01131
411483.FAEPRAA2165_03199(PF01554)
411483.FAEPRAA2165_02953PF03432
411483.FAEPRAA2165_00890(PF01624)
411483.FAEPRAA2165_02493(PF06418)
411483.FAEPRAA2165_02542(PF00239)
411483.FAEPRAA2165_02940(PF00239)
411483.FAEPRAA2165_03490(PF03577)
411483.FAEPRAA2165_00391(PF00239)
411483.FAEPRAA2165_02710(PF01624)
411483.FAEPRAA2165_00579(PF00239)
411483.FAEPRAA2165_03370(PF01554)
411483.FAEPRAA2165_02534PF03432
411483.FAEPRAA2165_02021(PF05063)
411483.FAEPRAA2165_00385(PF00239)
411483.FAEPRAA2165_00380(PF03054)
411483.FAEPRAA2165_00415PF05698
411483.FAEPRAA2165_03543(PF00239)not used
411483.FAEPRAA2165_03546(PF03577)not used
411483.FAEPRAA2165_00705(PF00231)
411483.FAEPRAA2165_00706(PF00231)
411483.FAEPRAA2165_02522(PF00239)
411483.FAEPRAA2165_02454(PF01554)
411483.FAEPRAA2165_02733(PF00239)
411483.FAEPRAA2165_03485(PF00365)
411483.FAEPRAA2165_00821PF03432
411483.FAEPRAA2165_02285(PF00239)
411483.FAEPRAA2165_02042(PF00239)
411483.FAEPRAA2165_00161(PF01554)
411483.FAEPRAA2165_00293(PF01554)
411483.FAEPRAA2165_02722(PF05063)
411483.FAEPRAA2165_00341(PF01554)
411483.FAEPRAA2165_00834(PF00239)
411483.FAEPRAA2165_03234(PF00239)
411483.FAEPRAA2165_01971(PF06418)
411483.FAEPRAA2165_02475(PF00365)
411483.FAEPRAA2165_02477(PF00365)
411483.FAEPRAA2165_01572(PF06100)
411483.FAEPRAA2165_01351(PF12646)
411483.FAEPRAA2165_01997(PF00239)
411483.FAEPRAA2165_03509(PF03577)not used
411483.FAEPRAA2165_00027(PF01554)
411483.FAEPRAA2165_02668(PF00239)
411483.FAEPRAA2165_02669(PF00239)
411483.FAEPRAA2165_02667(PF00239)
411483.FAEPRAA2165_00805(PF00239)
411483.FAEPRAA2165_02069PF03432
411483.FAEPRAA2165_02408(PF01624)
411483.FAEPRAA2165_00746(PF01554)
411483.FAEPRAA2165_02670(PF00239)
411483.FAEPRAA2165_00250(PF01751)
411483.FAEPRAA2165_02091PF01807
411483.FAEPRAA2165_02096(PF00239)not used
411483.FAEPRAA2165_02094(PF00239)
411483.FAEPRAA2165_02893(PF01554)
411483.FAEPRAA2165_01511(PF06100)
411483.FAEPRAA2165_00796PF01807
411483.FAEPRAA2165_00794(PF04561)
411483.FAEPRAA2165_00793(PF04561)
411483.FAEPRAA2165_00313(PF01554)
411483.FAEPRAA2165_03060(PF00239)
411483.FAEPRAA2165_00785(PF03054)
411483.FAEPRAA2165_03474PF05698
411483.FAEPRAA2165_00655(PF01554)
411483.FAEPRAA2165_00303(PF01554)
411483.FAEPRAA2165_00872(PF00239)
411483.FAEPRAA2165_03099(PF01554)
411483.FAEPRAA2165_01736(PF01554)
411483.FAEPRAA2165_01825(PF01751)
411483.FAEPRAA2165_00064(PF00239)
411483.FAEPRAA2165_00201PF03432
411483.FAEPRAA2165_00203PF01807
411483.FAEPRAA2165_03311PF03432
411483.FAEPRAA2165_02357(PF00365)
411483.FAEPRAA2165_02358(PF00365)
411483.FAEPRAA2165_01811PF05698
411483.FAEPRAA2165_01251(PF03054)
411483.FAEPRAA2165_01105(PF01554)
411483.FAEPRAA2165_00073PF01131
411483.FAEPRAA2165_00479(PF01554)
411483.FAEPRAA2165_03252PF03432
411483.FAEPRAA2165_03523(PF04794)
411483.FAEPRAA2165_03524(PF04794)
411483.FAEPRAA2165_03325PF01807
411483.FAEPRAA2165_00856PF01807
411483.FAEPRAA2165_02692PF03432
411483.FAEPRAA2165_01800(PF00231)
411483.FAEPRAA2165_02904(PF02475)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================