Metamenu

Effective results for Prevotella veroralis F0319 (eggnog40)

Summary

Number of putative secreted proteins: 87
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 21 eukaryotic-like domains, contained in 87 proteins (49 high, 38 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
649761.HMPREF0973_02916PF05598(mitochondrial)
649761.HMPREF0973_00678PF05598(mitochondrial)
649761.HMPREF0973_00675(PF03432)(mitochondrial)
649761.HMPREF0973_01039(PF03051)ER
649761.HMPREF0973_01007PF05598mitochondrial
649761.HMPREF0973_00838PF05598(mitochondrial)
649761.HMPREF0973_00837PF05598(mitochondrial)
649761.HMPREF0973_02577PF05598(mitochondrial)
649761.HMPREF0973_00141PF03644ER
649761.HMPREF0973_00140PF03644ER
649761.HMPREF0973_00771(PF03051)ER
649761.HMPREF0973_00571(PF00216)mitochondrial; (mitochondrial)
649761.HMPREF0973_02154PF05598mitochondrial
649761.HMPREF0973_01433(PF03051)ER
649761.HMPREF0973_02059(PF03092)ER
649761.HMPREF0973_00282(PF00328)ER
649761.HMPREF0973_00709PF05598(mitochondrial)
649761.HMPREF0973_00139PF03644ER
649761.HMPREF0973_02392(PF03432)mitochondrial
649761.HMPREF0973_02712(PF00216)(mitochondrial)
649761.HMPREF0973_02486(PF00216)mitochondrial
649761.HMPREF0973_01116PF05598(ER)
649761.HMPREF0973_00885(PF00216)mitochondrial
649761.HMPREF0973_02355PF05598(mitochondrial)
649761.HMPREF0973_00673PF01807 PF13155
649761.HMPREF0973_02749PF01807 PF13155
649761.HMPREF0973_01557PF01807 PF13155
649761.HMPREF0973_02327PF05598(mitochondrial)
649761.HMPREF0973_01493(PF05970) (PF02689)
649761.HMPREF0973_01570PF05598(mitochondrial)
649761.HMPREF0973_01818PF05598(mitochondrial)
649761.HMPREF0973_03048PF05598(mitochondrial)
649761.HMPREF0973_00158PF05598(mitochondrial)
649761.HMPREF0973_02157PF05598(mitochondrial)
649761.HMPREF0973_03062PF01807 PF13155
649761.HMPREF0973_00585PF01807 PF13155
649761.HMPREF0973_02520PF05598(mitochondrial)
649761.HMPREF0973_02638PF01807 PF13155
649761.HMPREF0973_02611PF05598(mitochondrial)
649761.HMPREF0973_01726PF05598(mitochondrial)
649761.HMPREF0973_01728PF05598(mitochondrial)
649761.HMPREF0973_00252PF05598(mitochondrial)
649761.HMPREF0973_00623PF05598(mitochondrial)
649761.HMPREF0973_02390PF01807 PF13155
649761.HMPREF0973_02666PF05598(mitochondrial)
649761.HMPREF0973_02807(PF00216)(mitochondrial)
649761.HMPREF0973_01712(PF00216)(mitochondrial)
649761.HMPREF0973_00095PF05598(mitochondrial)
649761.HMPREF0973_01902(PF00216)(mitochondrial)
649761.HMPREF0973_00883PF05598(mitochondrial)
649761.HMPREF0973_01584(PF03630)
649761.HMPREF0973_01585(PF00216)
649761.HMPREF0973_02696PF13151not used
649761.HMPREF0973_00531(PF03432)
649761.HMPREF0973_00330PF05598not used
649761.HMPREF0973_02688(PF04991)
649761.HMPREF0973_02683PF13151
649761.HMPREF0973_03083PF05598
649761.HMPREF0973_01495(PF01715)
649761.HMPREF0973_00556(PF13910)
649761.HMPREF0973_01154(PF04991)
649761.HMPREF0973_01572PF05598
649761.HMPREF0973_02779(PF16314)
649761.HMPREF0973_00814(PF05686)
649761.HMPREF0973_02891(PF00216)
649761.HMPREF0973_01701(PF04991)
649761.HMPREF0973_03059(PF03432)
649761.HMPREF0973_00972PF16269
649761.HMPREF0973_01165(PF05970)
649761.HMPREF0973_02522PF05598not used
649761.HMPREF0973_02521PF05598not used
649761.HMPREF0973_02633(PF03432)
649761.HMPREF0973_00008PF05598
649761.HMPREF0973_00101(PF00216)
649761.HMPREF0973_03024(PF03432)
649761.HMPREF0973_03021PF13155
649761.HMPREF0973_01387PF13151
649761.HMPREF0973_02675(PF16011)
649761.HMPREF0973_00245PF13155
649761.HMPREF0973_02753(PF03432)
649761.HMPREF0973_02804(PF05693)
649761.HMPREF0973_01877PF05598
649761.HMPREF0973_01675(PF01715)
649761.HMPREF0973_01901(PF00216)
649761.HMPREF0973_00562PF13155
649761.HMPREF0973_00644(PF00216)
649761.HMPREF0973_00867(PF00328)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================