Effective results for Streptococcus macacae NCTC 11558 (eggnog40)

Summary

Number of putative secreted proteins: 81
- Predicted by T4SEpre: 87
- Predicted by EffectiveELD: 5 eukaryotic-like domains, contained in 11 proteins (1 high, 10 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
764298.STRMA_1552+(PF02938)mitochondrial
764298.STRMA_0414+ER
764298.STRMA_0415+ER
764298.STRMA_1734+mitochondrial
764298.STRMA_1392+ER
764298.STRMA_0601+ER; (ER)
764298.STRMA_0028+ER
764298.STRMA_1074+ER
764298.STRMA_0075+mitochondrial
764298.STRMA_0615+ER
764298.STRMA_1887(PF05257)ER
764298.STRMA_0918+ER
764298.STRMA_0043+(ER)
764298.STRMA_1612+ER
764298.STRMA_0939+ER
764298.STRMA_1195+ER
764298.STRMA_1522+(mitochondrial)
764298.STRMA_1640(PF05257)ER
764298.STRMA_0540+ER
764298.STRMA_0306+ER
764298.STRMA_0974+mitochondrial; (mitochondrial)
764298.STRMA_0379+ER
764298.STRMA_1487(PF13787)ER
764298.STRMA_0752+ER
764298.STRMA_0427+(ER)
764298.STRMA_0184(PF08840)ER
764298.STRMA_1601+ER
764298.STRMA_1604+mitochondrial
764298.STRMA_0505(PF05257)ER
764298.STRMA_1676(PF13787)ER
764298.STRMA_1638+ER
764298.STRMA_1678+(mitochondrial)
764298.STRMA_1356+ER
764298.STRMA_0896+ER; (ER)
764298.STRMA_0002+ER
764298.STRMA_1389+ER
764298.STRMA_0060+(plastid)
764298.STRMA_0469+(plastid)
764298.STRMA_1324+(mitochondrial)
764298.STRMA_0736+(mitochondrial)
764298.STRMA_0708+
764298.STRMA_0118+
764298.STRMA_0288+
764298.STRMA_0915+
764298.STRMA_0914+
764298.STRMA_0823PF02916
764298.STRMA_1713+
764298.STRMA_0599+
764298.STRMA_0837(PF08840)
764298.STRMA_1002+
764298.STRMA_0457+
764298.STRMA_0452+
764298.STRMA_0120+
764298.STRMA_0022+
764298.STRMA_1683+
764298.STRMA_0920+
764298.STRMA_1458+
764298.STRMA_0556+
764298.STRMA_0317+
764298.STRMA_1167+
764298.STRMA_1165+
764298.STRMA_0301+
764298.STRMA_1493+
764298.STRMA_0764+
764298.STRMA_0247+
764298.STRMA_1952+
764298.STRMA_1953+
764298.STRMA_1486+
764298.STRMA_1766+
764298.STRMA_0360+
764298.STRMA_1588+
764298.STRMA_0229+
764298.STRMA_1579+
764298.STRMA_1376+
764298.STRMA_0428+
764298.STRMA_0869+
764298.STRMA_1282(PF02938)
764298.STRMA_0397+
764298.STRMA_1925(PF05257)
764298.STRMA_0897+
764298.STRMA_0007+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================