Metamenu

Genomes encoding eukaryotic-like proteins

PF00593 TonB dependent receptor

Copy number in non-pathogens:
Mean=11.60 Stddev=19.88

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Bacteroides xylanisolvens SD CC 1b s 4 94
Bacteroides xylanisolvens SD CC 2a s 4 93
Bacteroides thetaiotaomicron s 4 96
Bacteroides thetaiotaomicron s 4 105
Bacteroides thetaiotaomicron s 4 98
Bacteroides ovatus s 5 122
Bacteroides thetaiotaomicron s 4 93
Bacteroides dorei DSM 17855 s 4 93
Sphingobacterium spiritivorum ATCC 33861 s 4 94
Bacteroides xylanisolvens SD CC 1b s 4 97
Bacteroides xylanisolvens SD CC 2a s 4 96
Bacteroides ovatus SD CMC 3f s 5 113
Bacteroides cellulosilyticus DSM 14838 s 4 107
Bacteroides sp. 3_1_13 s 4 100
Bacteroides ovatus ATCC 8483 s 5 122
Caulobacter sp. AP07 s 5 112
Novosphingobium sp. AP12 s 4 107
Parabacteroides sp. ASF519 s 5 130
Butyricimonas synergistica DSM 23225 s 4 98
Bacteroides cellulosilyticus WH2 s 5 114
Parabacteroides gordonii DSM 23371 s 5 119
Runella zeae DSM 19591 s 4 102
Dyadobacter beijingensis DSM 21582 s 5 129
Echinicola pacifica DSM 19836 s 4 99
Bacteroides sp. 1_1_6 s 4 104
Bacteroides sp. 2_2_4 s 5 117
Bacteroides sp. D1 s 4 98
Bacteroides sp. D2 s 6 138
Bacteroides dorei 5_1_36/D4 s 4 92
Bacteroides sp. 2_1_22 s 4 97
Bacteroides sp. 3_1_23 s 5 126
Bacteroides ovatus 3_8_47FAA s 5 118
Bacteroides sp. D22 s 4 103
Bacteroides sp. 1_1_30 s 4 102
Bacteroides oleiciplenus YIT 12058 s 4 105
Sphingobium yanoikuyae ATCC 51230 s 4 99
Bacteroides cellulosilyticus CL02T12C19 s 4 104
Bacteroides ovatus CL02T12C04 s 5 130
Bacteroides ovatus CL03T12C18 s 5 124
Bacteroides xylanisolvens CL03T12C04 s 4 96
Parabacteroides goldsteinii CL02T12C30 s 5 123
Novosphingobium sp. B-7 s 4 99
Nitrospirillum amazonense Y2 s 4 108
Novosphingobium sp. Rr 2-17 s 4 98
Sphingomonas wittichii DP58 s 6 139
Sphingobacterium paucimobilis HER1398 s 4 99
Butyricimonas virosa DSM 23226 s 4 93
Dyadobacter fermentans DSM 18053 s 5 121
Sphingobacterium thalpophilum DSM 11723 s 4 109
Bacteroides thetaiotaomicron s 4 99
Bacteroides thetaiotaomicron s 4 106
Parabacteroides sp. HGS0025 s 5 121
Parabacteroides gordonii MS-1 s 5 119
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 5 128
Bacteroides ovatus s 5 128
Bacteroides ovatus s 5 124
Bacteroides thetaiotaomicron s 4 102
Bacteroides ovatus s 4 109
Bacteroides thetaiotaomicron s 4 95
Sphingomonas panacis s 4 101
Bacteroides xylanisolvens s 4 107
Bacteroides ovatus s 4 107
Bacteroides ovatus s 4 107
Bacteroides xylanisolvens s 4 103
Bacteroides ovatus s 5 124
Bacteroides thetaiotaomicron s 4 101
Sphingobacterium sp. B29 s 5 114
Bacteroides xylanisolvens s 4 93
Bacteroides xylanisolvens s 4 94
Bacteroides ovatus s 5 123
Bacteroides dorei s 4 94
Bacteroides thetaiotaomicron VPI-5482 s 4 104

*p=pathogen;s=symbiont