Genomes encoding eukaryotic-like proteins

PF01381 Helix-turn-helix

Copy number in non-pathogens:
Mean=10.15 Stddev=6.84

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Oscillibacter valericigenes Sjm18-20 s 5 45
Bacillus cereus s 4 38
Bacillus cereus s 4 43
Bacillus cereus s 4 39
Roseburia inulinivorans s 5 46
Clostridioides difficile s 4 39
Clostridioides difficile s 5 48
Clostridioides difficile s 4 38
Clostridioides difficile s 4 41
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 41
Clostridioides difficile s 4 38
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 41
Clostridioides difficile s 4 42
Clostridioides difficile s 4 44
Clostridioides difficile s 4 43
Clostridioides difficile s 4 39
Clostridioides difficile s 5 46
Clostridioides difficile s 4 41
Clostridioides difficile s 5 45
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 42
Clostridioides difficile s 4 39
Clostridioides difficile s 4 43
Clostridioides difficile s 4 44
Clostridioides difficile s 4 43
Clostridioides difficile s 4 39
Clostridioides difficile s 4 41
Clostridioides difficile s 4 43
Clostridioides difficile s 4 39
Clostridioides difficile s 6 54
Clostridioides difficile s 4 38
Clostridioides difficile s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 4 40
Dielma fastidiosa s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 5 49
Clostridioides difficile s 4 42
Clostridioides difficile s 4 41
Carnobacterium maltaromaticum s 4 40
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 5 46
Clostridioides difficile s 4 39
Clostridioides difficile s 4 44
Clostridioides difficile s 4 42
Clostridioides difficile s 5 48
Clostridioides difficile s 4 42
Clostridioides difficile s 4 44
Clostridioides difficile s 4 42
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 44
Clostridioides difficile s 4 44
Clostridioides difficile s 5 45
Clostridioides difficile s 5 45
Clostridioides difficile s 4 38
Clostridioides difficile s 4 40
Clostridioides difficile s 4 38
Clostridioides difficile s 4 40
Clostridioides difficile s 4 43
Clostridioides difficile s 4 44
Clostridioides difficile s 4 41
Clostridioides difficile s 4 40
Clostridioides difficile s 4 43
Clostridioides difficile s 4 41
Clostridioides difficile s 5 46
Clostridioides difficile s 5 46
Clostridioides difficile s 4 44
Clostridioides difficile s 4 42
Clostridioides difficile s 4 43
Clostridioides difficile s 4 42
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 4 42
Clostridioides difficile s 4 40
Clostridioides difficile s 4 41
Clostridioides difficile s 4 42
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 4 42
Clostridioides difficile s 4 43
Clostridioides difficile s 5 48
Clostridioides difficile s 4 40
Clostridioides difficile s 4 41
Clostridioides difficile s 4 43
Clostridioides difficile s 4 39
Clostridioides difficile s 4 41
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 43
Clostridioides difficile s 4 38
Clostridioides difficile s 5 48
Clostridioides difficile s 4 41
Clostridioides difficile s 4 41
Clostridioides difficile s 4 40
Clostridioides difficile s 4 42
Clostridioides difficile s 4 41
Clostridioides difficile s 4 40
Clostridioides difficile s 4 38
Clostridioides difficile s 4 41
Clostridioides difficile s 4 43
Clostridioides difficile s 4 44
Clostridioides difficile s 5 45
Clostridioides difficile s 4 43
Clostridioides difficile s 5 45
Clostridioides difficile s 5 45
Clostridioides difficile s 4 42
Clostridioides difficile s 4 39
Clostridioides difficile s 4 44
Clostridioides difficile s 4 39
Clostridioides difficile s 5 45
Clostridioides difficile s 4 40
Clostridioides difficile s 4 40
Clostridioides difficile s 5 45
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 43
Clostridioides difficile s 4 42
Clostridioides difficile s 4 42
Clostridioides difficile s 4 43
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 5 46
Clostridioides difficile s 4 40
Clostridioides difficile s 4 43
Clostridioides difficile s 4 41
Clostridioides difficile s 5 46
Clostridioides difficile s 5 45
Clostridioides difficile s 5 45
Clostridioides difficile s 4 41
Clostridioides difficile s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 43
Clostridioides difficile s 4 39
Roseburia inulinivorans s 4 40
[Clostridium] innocuum s 4 41
Blautia obeum s 4 38
Faecalicatena contorta s 5 50
[Eubacterium] rectale s 4 38
Flavonifractor plautii s 7 64
Blautia obeum s 4 41
Flavonifractor plautii s 5 50
[Eubacterium] rectale s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 39
Clostridioides difficile s 4 41
Clostridioides difficile s 4 43
Clostridioides difficile s 4 40
Clostridioides difficile s 4 39
Clostridioides difficile s 4 41
Clostridioides difficile s 5 48
Clostridioides difficile s 4 40
Clostridioides difficile s 4 40
Clostridioides difficile s 4 41
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 4 40
Clostridioides difficile s 4 43
Clostridioides difficile s 4 38
Clostridioides difficile s 4 43
Clostridioides difficile s 4 43
Clostridioides difficile s 4 43
Clostridioides difficile s 4 40
Clostridioides difficile s 5 47
Clostridioides difficile s 4 41
Clostridioides difficile s 5 48
Clostridioides difficile s 4 38
Clostridioides difficile s 4 41
Clostridioides difficile s 5 46
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 5 47
Clostridioides difficile s 5 45
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 4 41
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 43
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 6 52
Clostridioides difficile s 4 40
Clostridioides difficile s 5 49
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 5 45
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 4 44
Clostridioides difficile s 4 40
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 44
Clostridioides difficile s 4 38
Clostridioides difficile s 4 42
Clostridioides difficile s 5 47
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Clostridioides difficile s 4 44
Bittarella massiliensis s 4 38
Clostridioides difficile s 4 38
Bacillus cereus s 4 40
Bacillus cereus s 4 40
Bacillus thuringiensis s 4 41
Bacillus cereus s 4 40
Anaerotruncus colihominis DSM 17241 s 5 45
Dorea formicigenerans ATCC 27755 s 4 41
Marvinbryantia formatexigens DSM 14469 s 4 44
Tyzzerella nexilis DSM 1787 s 5 46
Clostridioides difficile NAP08 s 4 40
Hungatella hathewayi DSM 13479 s 4 38
[Clostridium] methylpentosum DSM 5476 s 4 44
Providencia alcalifaciens DSM 30120 s 4 38
Providencia rettgeri DSM 1131 s 4 44
Roseburia inulinivorans DSM 16841 s 4 39
Clostridium orbiscindens 1_3_50AFAA s 6 53
[Clostridium] bolteae WAL-14578 s 4 38
Pseudoflavonifractor capillosus ATCC 29799 s 5 47
[Clostridium] bolteae ATCC BAA-613 s 4 38
Flavonifractor plautii ATCC 29863 s 5 46
Bacillus cereus ATCC 10876 s 4 43
Bacillus cereus AH621 s 4 39
Bacillus thuringiensis serovar thuringiensis str. T01001 s 5 46
Bacillus thuringiensis serovar kurstaki str. T03a001 s 4 39
Bacillus thuringiensis serovar pakistani str. T13001 s 5 49
Bacillus thuringiensis Bt407 s 4 39
Bacillus thuringiensis IBL 4222 s 5 49
Bacillus thuringiensis IBL 200 s 5 46
Bacillus cereus Rock3-29 s 4 43
Bacillus thuringiensis serovar berliner ATCC 10792 s 4 43
Bacillus cereus IS075 s 4 43
Enterococcus pallens ATCC BAA-351 s 4 39
Enterococcus gilvus ATCC BAA-350 s 4 40
Lachnospiraceae bacterium A4 s 7 63
Lachnospiraceae bacterium M18-1 s 6 58
Lachnospiraceae bacterium A2 s 6 58
Oscillibacter sp. 1-3 s 7 63
Clostridium sp. ASF356 s 5 51
Eubacterium plexicaudatum ASF492 s 7 64
Clostridium sp. ASF502 s 7 60
Clostridioides difficile 824 s 4 43
Clostridioides difficile CD113 s 4 39
Clostridioides difficile CD160 s 6 55
Clostridioides difficile CD17 s 4 39
Clostridioides difficile CD45 s 4 43
Clostridioides difficile CD69 s 4 40
Clostridioides difficile CD88 s 4 41
Clostridioides difficile DA00134 s 4 41
Clostridioides difficile P24 s 4 41
Clostridioides difficile P29 s 4 44
Clostridioides difficile P38 s 4 44
Clostridioides difficile P51 s 4 42
Clostridioides difficile P59 s 4 38
Clostridioides difficile F548 s 4 42
Clostridioides difficile P25 s 4 41
Clostridioides difficile P50 s 5 46
Sinorhizobium medicae WSM1115 s 4 38
Oscillibacter sp. KLE 1745 s 8 65
Clostridium sp. ATCC BAA-442 s 7 62
Clostridium sp. KLE 1755 s 5 46
Oscillibacter sp. KLE 1728 s 8 67
Clostridium sp. ATCC 29733 s 4 41
Blautia wexlerae DSM 19850 s 4 41
Blautia producta ATCC 27340 = DSM 2950 s 6 54
Bacillus sp. 105MF s 4 40
Blautia producta ATCC 27340 = DSM 2950 s 6 53
Coprobacillus sp. D6 s 5 46
Coprobacillus sp. 8_2_54BFAA s 4 41
Erysipelotrichaceae bacterium 21_3 s 5 48
Erysipelotrichaceae bacterium 3_1_53 s 5 49
Erysipelotrichaceae bacterium 6_1_45 s 6 55
Lachnospiraceae bacterium 3_1_57FAA_CT1 s 6 58
Lachnospiraceae bacterium 7_1_58FAA s 9 73
Coprobacillus sp. 3_3_56FAA s 4 39
Lachnospiraceae bacterium 3_1_46FAA s 4 38
Subdoligranulum sp. 4_3_54A2FAA s 5 46
Erysipelotrichaceae bacterium 2_2_44A s 6 55
Coprobacillus sp. 29_1 s 5 45
Hungatella hathewayi WAL-18680 s 6 57
Dorea formicigenerans 4_6_53AFAA s 6 57
Paenibacillus alvei DSM 29 s 5 48
Clostridioides difficile QCD-63q42 s 4 41
Bacillus thuringiensis serovar aizawai str. Leapi01 s 6 52
[Clostridium] bolteae 90B3 s 5 45
[Clostridium] clostridioforme 90A6 s 5 47
[Clostridium] clostridioforme 90A4 s 4 39
[Clostridium] clostridioforme 90A7 s 4 41
[Clostridium] clostridioforme 90A8 s 5 47
[Clostridium] innocuum 2959 s 5 47
Bacillus cereus HD73 s 4 40
Bacillus cereus IS845/00 s 4 43
Enterococcus pallens ATCC BAA-351 s 4 39
Enterococcus gilvus ATCC BAA-350 s 4 40
Providencia alcalifaciens PAL-3 s 4 42
Providencia alcalifaciens F90-2004 s 4 42
Bacillus thuringiensis Bt407 s 4 39
Bacillus thuringiensis serovar finitimus YBT-020 s 4 39
Bacillus cereus AH187 s 4 38
Bacillus thuringiensis s 5 46
Providencia alcalifaciens 205/92 s 4 38
Providencia alcalifaciens R90-1475 s 4 38
Providencia alcalifaciens PAL-1 s 4 42
Clostridioides difficile s 5 47
Clostridioides difficile s 4 40
Clostridioides difficile s 4 44
Clostridioides difficile s 4 40
Bacillus cereus ATCC 10876 s 4 42
Bacillus cereus s 4 38
[Clostridium] cellobioparum DSM 1351 = ATCC 15832 s 4 41
Butyrivibrio sp. LB2008 s 4 43
[Clostridium] lactatifermentans DSM 14214 s 4 41
Carnobacterium maltaromaticum s 5 45
Carnobacterium maltaromaticum s 4 40
Butyrivibrio sp. AE2032 s 4 39
Blautia schinkii DSM 10518 s 6 53
Intestinimonas butyriciproducens s 5 45
[Clostridium] innocuum s 5 45
Clostridioides difficile s 4 44
Clostridioides difficile s 4 41
Bacillus cereus s 5 46
Bacillus thuringiensis s 4 39
Intestinimonas butyriciproducens s 4 42
Morganella morganii s 4 41
Clostridium botulinum s 4 38
Clostridioides difficile s 5 51
Enterococcus avium s 4 38
Clostridium sporogenes s 4 38
Enterococcus avium s 4 38
Bacillus cereus s 4 39
Bacillus cereus s 4 38
Bacillus cereus s 5 47
Bacillus cereus s 6 52
Bacillus thuringiensis s 5 51
Clostridium botulinum s 4 38
Clostridioides difficile s 5 50
Clostridioides difficile s 5 51
Clostridioides difficile s 5 51
Clostridioides difficile s 4 39
Ruthenibacterium lactatiformans s 4 40
Bacillus cereus s 6 53
Bacillus cereus s 4 40
Bacillus cereus s 5 47
Bacillus cereus s 6 53
Clostridioides difficile s 4 44
Bacillus cereus s 4 42
Bacillus thuringiensis s 5 48
Bacillus thuringiensis s 4 42
Clostridium botulinum s 4 41
Clostridium botulinum s 4 44
Clostridium botulinum s 5 50
Bacillus cereus s 4 38
Bacillus cereus s 5 45
Bacillus cereus s 4 41
Bacillus cereus s 4 38
Bacillus cereus s 4 39
Bacillus cereus s 4 42
Bacillus cereus s 4 44
Bacillus cereus s 6 52
Bacillus cereus s 4 44
Bacillus cereus s 4 44
Bacillus cereus s 4 39
Bacillus cereus s 4 40
Bacillus thuringiensis s 4 44
Bacillus thuringiensis s 4 44
[Clostridium] innocuum s 5 48
Flavonifractor plautii s 4 40
Proteus mirabilis s 4 39
Bacillus cereus s 4 38
Bacillus thuringiensis s 4 44
Ruthenibacterium lactatiformans s 4 41
Bacillus thuringiensis s 5 49
Bacillus cereus s 4 43
Bacillus thuringiensis s 5 48
Eubacterium limosum s 4 39
Lachnoclostridium sp. YL32 s 5 46
Blautia sp. YL58 s 4 40
Flavonifractor plautii s 4 40
Ruminiclostridium sp. KB18 s 5 45
Erysipelotrichaceae bacterium I46 s 5 48
Bacillus thuringiensis s 4 42
Bacillus thuringiensis s 4 39
Bacillus thuringiensis s 4 40
[Clostridium] innocuum s 4 39
Clostridioides difficile s 4 39
Clostridioides difficile s 5 46
Bacillus cereus s 5 46
Bacillus cereus s 5 51
Bacillus cereus s 4 41
Eisenbergiella tayi s 7 59
Eisenbergiella tayi s 10 82
Eisenbergiella tayi s 7 59
Eisenbergiella tayi s 6 52
Eisenbergiella tayi s 8 65
Eisenbergiella tayi s 7 62
Eisenbergiella tayi s 7 62
Clostridioides difficile s 4 41
Clostridioides difficile s 4 38
Clostridioides difficile s 4 39
Clostridioides difficile s 4 38
Clostridioides difficile s 4 38
Bacillus cereus s 4 38
Bacillus cereus s 5 51
Bacillus cereus s 4 42
Bacillus mycoides s 4 42
Intestinimonas butyriciproducens s 4 43
Bacillus cereus s 4 43
Bacillus cereus s 4 42
Bacillus cereus s 4 41
Bacillus cereus s 4 42
Bacillus thuringiensis s 4 42
Bacillus thuringiensis s 7 61
Clostridioides difficile s 4 38
Eisenbergiella tayi s 7 59
Bacillus cereus s 8 65
Bacillus mycoides s 4 40
Bacillus cereus s 5 45
Bacillus anthracis s 4 38
Bacillus cereus s 4 38
Bacillus cereus s 5 51
Bacillus thuringiensis s 5 50
Flavonifractor plautii s 4 44
Bacillus mycoides s 7 63
Bacillus thuringiensis s 4 40
Clostridioides difficile s 4 38
Bacillus cereus s 5 51
Bacillus cereus s 5 45
Bacillus cereus s 5 48
Bacillus cereus s 4 43
Bacillus cereus s 5 46

*p=pathogen;s=symbiont