Metamenu

Genomes encoding eukaryotic-like proteins

PF03051 Peptidase C1-like family

Copy number in non-pathogens:
Mean=0.17 Stddev=0.54

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Lactobacillus gasseri ATCC 33323 = JCM 1131 s 7 4
Prevotella falsenii DSM 22864 = JCM 15124 s 5 3
Prevotella micans DSM 21469 = JCM 16134 s 5 3
Prevotella histicola JCM 15637 = DNF00424 s 5 3
Prevotella amnii DSM 23384 = JCM 14753 s 7 4
Prevotella scopos JCM 17725 s 5 3
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 5 3
Prevotella aurantiaca JCM 15754 s 5 3
Prevotella shahii DSM 15611 = JCM 12083 s 5 3
Prevotella corporis DSM 18810 = JCM 8529 s 5 3
Lactobacillus kitasatonis DSM 16761 = JCM 1039 s 7 4
Prevotella intermedia s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Bifidobacterium longum subsp. longum s 5 3
Bifidobacterium longum subsp. infantis 157F s 5 3
Lactobacillus hominis DSM 23910 = CRBIP 24.179 s 8 5
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 s 5 3
Lactobacillus crispatus ST1 s 7 4
Lactobacillus acidophilus DSM 9126 s 7 4
Lactobacillus equicursoris 66c s 5 3
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 5 3
Lactobacillus johnsonii FI9785 s 7 4
Alistipes obesi s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 s 5 3
Bacteroides xylanisolvens SD CC 1b s 5 3
Bacteroides xylanisolvens SD CC 2a s 5 3
Lactobacillus sp. OTU4228 s 7 4
Parabacteroides distasonis s 5 3
Actinobaculum massiliense s 5 3
Parabacteroides distasonis s 5 3
Parabacteroides distasonis s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Bacteroides vulgatus s 5 3
Bacteroides vulgatus s 5 3
Parabacteroides distasonis s 5 3
Bacteroides ovatus s 5 3
Bacteroides vulgatus s 5 3
Parabacteroides distasonis s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium longum s 5 3
Bacteroides coprocola DSM 17136 s 5 3
Bacteroides plebeius DSM 17135 s 5 3
Bacteroides dorei DSM 17855 s 5 3
Lactobacillus acidophilus ATCC 4796 s 7 4
Lactobacillus johnsonii ATCC 33200 s 10 6
Lactobacillus ultunensis DSM 16047 s 5 3
Lactobacillus gasseri JV-V03 s 8 5
Lactobacillus jensenii 269-3 s 5 3
Prevotella melaninogenica ATCC 25845 s 5 3
Lactobacillus gasseri 202-4 s 7 4
Lactobacillus crispatus JV-V01 s 7 4
Lactobacillus crispatus 214-1 s 7 4
Prevotella timonensis CRIS 5C-B1 s 5 3
Prevotella buccalis ATCC 35310 s 5 3
Prevotella amnii CRIS 21A-A s 7 4
Bacteroides xylanisolvens SD CC 1b s 5 3
Bacteroides vulgatus PC510 s 5 3
Bacteroides xylanisolvens SD CC 2a s 5 3
Prevotella bivia JCVIHMP010 s 7 4
Bacteroides ovatus SD CMC 3f s 5 3
Parabacteroides johnsonii DSM 18315 s 5 3
Prevotella copri DSM 18205 s 5 3
Prevotella oris F0302 s 5 3
Prevotella veroralis F0319 s 5 3
Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 s 5 3
Prevotella denticola F0289 s 5 3
Prevotella disiens FB035-09AN s 7 4
Bifidobacterium breve ACS-071-V-Sch8b s 5 3
Bacteroides sp. 3_1_13 s 5 3
Parabacteroides sp. D26 s 5 3
Prevotella marshii DSM 16973 = JCM 13450 s 5 3
Prevotella bergensis DSM 17361 s 5 3
Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 s 7 4
Prevotella denticola CRIS 18C-A s 5 3
Prevotella oralis ATCC 33269 s 5 3
Prevotella salivae DSM 15606 s 5 3
Prevotella sp. oral taxon 472 str. F0295 s 5 3
Prevotella multiformis DSM 16608 s 5 3
Prevotella nigrescens ATCC 33563 s 5 3
Prevotella pallens ATCC 700821 s 5 3
Lactobacillus amylolyticus DSM 11664 s 7 4
Bacteroides caccae ATCC 43185 s 5 3
Parabacteroides merdae ATCC 43184 s 5 3
Bacteroides ovatus ATCC 8483 s 5 3
Bacteroides uniformis ATCC 8492 s 5 3
Bacteroides salanitronis DSM 18170 s 5 3
Prevotella baroniae F0067 s 5 3
Prevotella oralis CC98A s 5 3
Prevotella nigrescens CC14M s 5 3
Lactobacillus sp. ASF360 s 7 4
Parabacteroides sp. ASF519 s 5 3
Lactobacillus gasseri K7 s 7 4
Prevotella nanceiensis DSM 19126 = JCM 15639 s 5 3
Butyricimonas synergistica DSM 23225 s 7 4
Prevotella multisaccharivorax DSM 17128 s 5 3
Prevotella bivia DSM 20514 s 7 4
Lactobacillus jensenii MD IIE-70(2) s 5 3
Prevotella stercorea DSM 18206 s 5 3
Prevotella salivae F0493 s 5 3
Lactobacillus helveticus DSM 20075 = CGMCC 1.1877 s 7 4
Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162 s 5 3
Lactobacillus johnsonii ATCC 33200 s 7 4
Lactobacillus psittaci DSM 15354 s 5 3
Lactobacillus crispatus DSM 20584 = JCM 1185 s 7 4
Lactobacillus hominis DSM 23910 = CRBIP 24.179 s 8 5
Lactobacillus kalixensis DSM 16043 s 7 4
Lactobacillus ultunensis DSM 16047 s 5 3
Lactobacillus kitasatonis DSM 16761 = JCM 1039 s 7 4
Lactobacillus amylolyticus DSM 11664 s 7 4
Prevotella sp. BV3P1 s 5 3
Prevotella pleuritidis F0068 s 5 3
Prevotella saccharolytica F0055 s 5 3
Prevotella disiens JCM 6334 = ATCC 29426 s 7 4
Prevotella sp. F0091 s 5 3
Prevotella oris DSM 18711 = JCM 12252 s 5 3
Prevotella amnii DSM 23384 = JCM 14753 s 7 4
Prevotella albensis DSM 11370 = JCM 12258 s 5 3
Prevotella intermedia ATCC 25611 = DSM 20706 s 5 3
Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 s 5 3
Prevotella baroniae DSM 16972 = JCM 13447 s 5 3
Lactobacillus psittaci DSM 15354 s 5 3
Parabacteroides gordonii DSM 23371 s 7 4
Prevotella denticola DSM 20614 = JCM 13449 s 5 3
Prevotella corporis DSM 18810 = JCM 8529 s 5 3
Lactobacillus ceti DSM 22408 s 5 3
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 s 5 3
Prevotella veroralis DSM 19559 = JCM 6290 s 5 3
Bifidobacterium magnum DSM 20222 s 5 3
Prevotella micans DSM 21469 = JCM 16134 s 5 3
Bifidobacterium magnum DSM 20222 s 5 3
Parabacteroides sp. 2_1_7 s 5 3
Bacteroides sp. 2_2_4 s 5 3
Bacteroides sp. 4_3_47FAA s 5 3
Bacteroides sp. 9_1_42FAA s 5 3
Bacteroides sp. D1 s 5 3
Bacteroides sp. D2 s 5 3
Bacteroides dorei 5_1_36/D4 s 5 3
Lactobacillus crispatus MV-1A-US s 7 4
Bacteroides sp. 2_1_22 s 5 3
Bacteroides sp. 2_1_33B s 5 3
Bacteroides sp. 3_1_33FAA s 5 3
Bacteroides sp. D20 s 5 3
Parabacteroides sp. D13 s 5 3
Lactobacillus crispatus 125-2-CHN s 7 4
Lactobacillus crispatus MV-3A-US s 7 4
Lactobacillus jensenii SJ-7A-US s 5 3
Parabacteroides sp. 20_3 s 5 3
Bacteroides sp. 3_1_23 s 5 3
Bacteroides sp. 3_1_40A s 5 3
Bacteroides sp. 4_1_36 s 5 3
Bacteroides ovatus 3_8_47FAA s 5 3
Prevotella melaninogenica D18 s 5 3
Prevotella sp. oral taxon 299 str. F0039 s 5 3
Bacteroides sp. 3_1_19 s 5 3
Bacteroides sp. D22 s 5 3
Bacteroides sp. 1_1_30 s 5 3
Prevotella sp. C561 s 5 3
Lactobacillus crispatus SJ-3C-US s 7 4
Lactobacillus gasseri SJ-9E-US s 7 4
Prevotella oris C735 s 5 3
Lactobacillus gasseri SV-16A-US s 7 4
Odoribacter laneus YIT 12061 s 5 3
Prevotella histicola F0411 s 5 3
Prevotella micans F0438 s 5 3
Actinobaculum massiliense ACS-171-V-Col2 s 5 3
Lactobacillus crispatus FB077-07 s 7 4
Lactobacillus crispatus FB049-03 s 7 4
Bacteroides caccae CL03T12C61 s 5 3
Bacteroides dorei CL02T00C15 s 5 3
Bacteroides dorei CL02T12C06 s 5 3
Bacteroides dorei CL03T12C01 s 5 3
Bacteroides ovatus CL02T12C04 s 5 3
Bacteroides ovatus CL03T12C18 s 5 3
Bacteroides vulgatus CL09T03C04 s 5 3
Bacteroides xylanisolvens CL03T12C04 s 5 3
Parabacteroides distasonis CL03T12C09 s 5 3
Parabacteroides distasonis CL09T03C24 s 5 3
Parabacteroides goldsteinii CL02T12C30 s 5 3
Parabacteroides johnsonii CL02T12C29 s 5 3
Parabacteroides merdae CL03T12C32 s 5 3
Parabacteroides merdae CL09T00C40 s 5 3
Lactobacillus johnsonii pf01 s 10 6
Lactobacillus gasseri 2016 s 7 4
Bifidobacterium breve DPC 6330 s 5 3
Lactobacillus gasseri CECT 5714 s 7 4
Bifidobacterium breve CECT 7263 s 5 3
Lactobacillus crispatus EM-LC1 s 7 4
Prevotella intermedia ATCC 25611 = DSM 20706 s 5 3
Butyricimonas virosa DSM 23226 s 7 4
Prevotella sp. oral taxon 317 str. F0108 s 5 3
Parabacteroides sp. D25 s 5 3
Prevotella nigrescens F0103 s 5 3
Bifidobacterium breve HPH0326 s 5 3
Prevotella oralis HGA0225 s 5 3
Prevotella sp. ICM33 s 5 3
Lactobacillus gasseri ATCC 33323 = JCM 1131 s 7 4
Lactobacillus delbrueckii subsp. bulgaricus 2038 s 5 3
Lactobacillus amylovorus GRL 1112 s 7 4
Lactobacillus amylovorus GRL1118 s 7 4
Lactobacillus helveticus R0052 s 7 4
Lactobacillus amylovorus s 7 4
Lactobacillus johnsonii NCC 533 s 10 6
Lactobacillus johnsonii DPC 6026 s 10 6
Lactobacillus delbrueckii subsp. bulgaricus ND02 s 5 3
Prevotella intermedia 17 s 5 3
Bifidobacterium breve UCC2003 s 5 3
Bacteroides vulgatus ATCC 8482 s 5 3
Parabacteroides distasonis ATCC 8503 s 5 3
Lactobacillus plantarum s 5 3
Prevotella sp. HUN102 s 5 3
Lactobacillus kunkeei EFB6 s 5 3
Prevotella sp. MA2016 s 5 3
Lactobacillus amylovorus DSM 16698 s 7 4
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 s 5 3
Lactobacillus ceti DSM 22408 s 5 3
Lactobacillus helveticus s 7 4
Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930 s 5 3
Prevotella sp. S7-1-8 s 5 3
Prevotella bivia DNF00188 s 7 4
Prevotella histicola JCM 15637 = DNF00424 s 5 3
Bifidobacterium breve S27 s 5 3
Lactobacillus helveticus s 7 4
Lactobacillus helveticus s 7 4
Lactobacillus helveticus s 7 4
Lactobacillus gasseri s 7 4
Lactobacillus gasseri s 7 4
Lactobacillus gasseri s 8 5
Lactobacillus gasseri s 8 5
Prevotella bivia s 7 4
Lactobacillus gasseri s 7 4
Lactobacillus gasseri s 8 5
Lactobacillus helveticus s 7 4
Parabacteroides sp. HGS0025 s 7 4
Parabacteroides gordonii MS-1 s 7 4
Parabacteroides goldsteinii DSM 19448 = WAL 12034 s 5 3
Prevotella intermedia s 5 3
Bacteroides ovatus s 5 3
Bacteroides dorei CL03T12C01 s 5 3
Bacteroides ovatus s 5 3
Lactobacillus crispatus s 7 4
Lactobacillus gasseri s 7 4
Prevotella corporis s 5 3
Prevotella bivia s 7 4
Prevotella bivia s 7 4
Bacteroides caecimuris s 5 3
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Prevotella scopos JCM 17725 s 5 3
Bacteroides ovatus s 5 3
Lactobacillus helveticus s 7 4
Bacteroides vulgatus s 5 3
Lactobacillus gallinarum s 7 4
Prevotella enoeca s 5 3
Prevotella amnii s 7 4
Lactobacillus johnsonii s 8 5
Lactobacillus helveticus s 7 4
Lactobacillus helveticus s 7 4
Bacteroides vulgatus s 5 3
Bacteroides xylanisolvens s 5 3
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus crispatus s 7 4
Prevotella intermedia ATCC 25611 = DSM 20706 s 5 3
Prevotella intermedia s 5 3
Lactobacillus johnsonii s 7 4
Lactobacillus johnsonii s 7 4
Bacteroides caecimuris s 5 3
Lactobacillus johnsonii s 8 5
Lactobacillus gasseri s 7 4
Bacteroides ovatus s 5 3
Bacteroides ovatus s 5 3
Prevotella ruminicola s 5 3
Bifidobacterium breve s 5 3
Lactobacillus crispatus s 7 4
Lactobacillus helveticus s 7 4
Lactobacillus helveticus s 7 4
Bacteroides ovatus s 5 3
Prevotella oralis s 5 3
Prevotella scopos JCM 17725 s 5 3
Lactobacillus helveticus s 7 4
Lactobacillus crispatus s 7 4
Lactobacillus jensenii s 5 3
Prevotella melaninogenica s 5 3
Vagococcus sp. D7T301 s 5 3
Lactobacillus gasseri s 7 4
Lactobacillus gasseri s 8 5
Lactobacillus johnsonii s 10 6
Bifidobacterium breve s 5 3
Lactobacillus gallinarum s 7 4
Bacteroides xylanisolvens s 5 3
Bacteroides xylanisolvens s 5 3
Lactobacillus gallinarum s 7 4
Lactobacillus gallinarum s 7 4
Lactobacillus gallinarum s 7 4
Bacteroides dorei s 5 3
Bacteroides ovatus s 5 3
Lactobacillus johnsonii s 7 4
Parabacteroides distasonis s 5 3
Bacteroides dorei s 5 3
Bifidobacterium breve s 5 3
Bifidobacterium pseudocatenulatum s 5 3
Bifidobacterium breve s 5 3
Lactobacillus crispatus s 7 4
Prevotella intermedia s 5 3
Lactobacillus gasseri s 7 4
Lactobacillus acidophilus NCFM s 7 4

*p=pathogen;s=symbiont