Metamenu

Genomes encoding eukaryotic-like proteins

PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal

Copy number in non-pathogens:
Mean=0.11 Stddev=0.42

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Verrucomicrobium sp. BvORR034 s 9 4
Verrucomicrobium sp. BvORR106 s 11 5
Nocardia puris NBRC 108233 s 4 2
Nocardia sienata NBRC 100364 s 4 2
Nocardia vaccinii NBRC 15922 s 4 2
Nocardia testacea NBRC 100365 s 4 2
Paenibacillus senegalensis JC66 s 4 2
Mycobacterium tuberculosis s 4 2
Chthoniobacter flavus Ellin428 s 6 3
Holdemania filiformis DSM 12042 s 4 2
Leptospira licerasiae serovar Varillal str. MMD0835 s 6 3
Rhizobium sp. CF080 s 4 2
Leptospira sp. B5-022 s 6 3
Leptospira meyeri serovar Semaranga str. Veldrot Semarang 173 s 4 2
Leptonema illini DSM 21528 s 4 2
Rhodopirellula baltica SWK14 s 4 2
Cyclobacterium marinum DSM 745 s 16 7
Mycobacterium tuberculosis UT0017 s 4 2
Stigmatella aurantiaca DW4/3-1 s 4 2
Leptospira licerasiae str. MMD4847 s 6 3
Leptospira licerasiae serovar Varillal str. VAR 010 p 6 3
Leptospira wolffii serovar Khorat str. Khorat-H2 s 6 3
Runella zeae DSM 19591 s 6 3
Erysipelotrichaceae bacterium 21_3 s 4 2
Erysipelotrichaceae bacterium 6_1_45 s 4 2
Erysipelotrichaceae bacterium 2_2_44A s 4 2
Kocuria palustris PEL s 4 2
Leptospira licerasiae ATCC BAA-1110 s 6 3
[Clostridium] innocuum 2959 s 4 2
Dyadobacter fermentans DSM 18053 s 4 2
Stigmatella aurantiaca DW4/3-1 s 4 2
Acaryochloris marina MBIC11017 s 4 2
Nocardia nova SH22a s 6 3
Endozoicomonas numazuensis s 4 2
Thalassomonas viridans s 4 2
Endozoicomonas arenosclerae s 9 4
[Clostridium] innocuum s 4 2
Kocuria palustris s 4 2
Leptospira alstonii s 4 2
Erysipelotrichaceae bacterium I46 s 4 2

*p=pathogen;s=symbiont