Metamenu

Genomes encoding eukaryotic-like proteins

PF12323 Helix-turn-helix domain

Copy number in non-pathogens:
Mean=0.60 Stddev=2.55

Genomes significantly enriched in this eukaryotic-like domain (ELD; score >= 4):

Genome Class* ELD score Number of proteins containing this domain
Microcystis aeruginosa NIES-843 s 13 35
Proteus mirabilis HI4320 s 4 11
Clostridioides difficile s 6 16
Clostridioides difficile CD196 s 5 15
Clostridioides difficile M120 s 7 19
Paenibacillus riograndensis SBR5 s 4 11
[Eubacterium] hallii s 4 12
Clostridioides difficile s 5 14
Blautia massiliensis s 4 12
Lactobacillus reuteri SD2112 s 4 13
Fusobacterium nucleatum 13_3C s 6 17
Geitlerinema sp. PCC 7105 s 15 39
Calothrix sp. PCC 6303 s 4 11
Pleurocapsa sp. PCC 7319 s 10 27
Bifidobacterium gallicum DSM 20093 = LMG 11596 s 4 13
Lactobacillus fermentum 3872 s 5 14
Frankia sp. Cc1.17 s 4 12
Bacillus smithii 7_3_47FAA s 4 13
Sutterella wadsworthensis 2_1_59BFAA s 5 15
Clostridioides difficile QCD-66c26 s 5 14
Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 s 5 15
Bacillus cereus E33L s 4 12
Frankia sp. EAN1pec s 8 21
Lactobacillus amylovorus GRL 1112 s 4 13
Gallibacterium anatis UMN179 s 4 13
Bifidobacterium gallicum DSM 20093 = LMG 11596 s 4 13
Lactobacillus helveticus s 8 21
Bacillus cereus E33L s 4 11
Bacillus thuringiensis s 4 11
Lactobacillus helveticus s 5 15
Clostridioides difficile s 4 11
Photorhabdus temperata subsp. thracensis s 6 18
Bacillus thuringiensis s 5 15
Lactobacillus helveticus s 6 18
Lactobacillus gallinarum s 5 15
Aerococcus viridans s 4 11
Lactobacillus helveticus s 4 12
Bacillus thuringiensis s 4 12
Bacillus cereus s 4 13
Bacillus thuringiensis s 5 15
Lactobacillus helveticus s 7 19
Lactobacillus helveticus s 7 19
Clostridioides difficile s 6 16
Clostridioides difficile s 6 16
Clostridioides difficile s 6 16
Clostridioides difficile s 8 22
Clostridioides difficile s 8 22
Lactobacillus fermentum s 7 19
Bacillus cereus s 5 15
Lentzea albidocapillata s 4 12
Bacillus coagulans s 4 11
Halomonas meridiana s 4 12
Halomonas meridiana s 4 12
Halomonas meridiana s 4 12
Lactobacillus fermentum s 4 12
Bacillus cereus s 5 14
Lactobacillus fermentum s 7 20
Photobacterium damselae subsp. damselae s 4 11
Lactobacillus fermentum s 6 16
Bacillus cereus s 4 13
Bacillus cereus s 4 12

*p=pathogen;s=symbiont