Metamenu
University of Vienna
Research network CMM
Dept of Microbiology and Ecosystem Science
CUBE
VOGDB
SIMAP
Gepard
GenSkew
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PICA
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Eukaryotic like proteins
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Genome: Shigella boydii CDC 3083-94
Taxonomyid:
344609
Class: s (p=pathogen;s=symbiont)
Domain:
PF03400
Copy number in non-pathogens:
Mean=0.05 Stddev=0.43
Proteins containing this domain:
accession
genenames
locustags
description
WP_000055351.1
transposase
WP_000089764.1
transposase
WP_000089768.1
transposase
WP_000089772.1
transposase
WP_000089817.1
transposase
WP_000089819.1
transposase
WP_000089821.1
transposase
WP_000089822.1
transposase
WP_000089832.1
transposase
WP_000344388.1
transposase
WP_000344403.1
transposase
WP_000344405.1
transposase
WP_000344406.1
transposase
WP_000634405.1
transposase
WP_000945967.1
transposase
WP_001119199.1
transposase
WP_001119250.1
transposase
WP_001277833.1
transposase
WP_001355898.1
transposase
WP_001386624.1
transposase
WP_011378943.1
transposase
WP_011379166.1
transposase
WP_012421209.1
transposase
WP_012421214.1
transposase
WP_012421230.1
transposase
WP_012421232.1
transposase
WP_012421287.1
transposase
WP_012421289.1
transposase
WP_012421290.1
transposase
WP_012421294.1
transposase
WP_012421298.1
transposase
WP_012421339.1
transposase
WP_012421350.1
transposase
WP_012421363.1
transposase
WP_012421385.1
transposase
WP_012421391.1
transposase
WP_012421426.1
transposase
WP_012421435.1
transposase
WP_012421440.1
transposase
WP_012421509.1
transposase
WP_012421513.1
transposase
WP_012421523.1
transposase
WP_012421524.1
transposase
WP_012421525.1
transposase
WP_012421536.1
transposase
WP_012421571.1
transposase
WP_012421594.1
transposase
WP_012421599.1
transposase
WP_024258530.1
transposase
WP_039058897.1
transposase
WP_044815326.1
transposase
WP_048815010.1
transposase
WP_071821500.1
hypothetical protein
WP_071821530.1
transposase
WP_071821669.1
transposase
Release announcements
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News
EffectiveDB genome mode fixed
24.11.20
EFFECTIVEELD 5.2: EUKARYOTIC-LIKE DOMAIN PREDICTION UPGRADED TO PFAM 31
20.08.17
EffectiveELD 5.1: Eukaryotic-like domain prediction upgraded to Pfam 29
24.06.16
Latest publications
EffectiveDB-updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.
Prediction of microbial phenotypes based on comparative genomics.
Contact
+43 1 4277 76681
+43 1 4277 876681
contact.cube@univie.ac.at