Effective results for Streptococcus salivarius 57.I (eggnog40)

Summary

Number of putative secreted proteins: 29
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 29 proteins (2 high, 27 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
1046629.Ssal_01158(PF06176)(mitochondrial)
1046629.Ssal_00871PF02210ER
1046629.Ssal_01473(PF01501)(ER)
1046629.Ssal_00686(PF01501)mitochondrial
1046629.Ssal_00692(PF00344)ER
1046629.Ssal_01182PF02916ER
1046629.Ssal_00104(PF00344)mitochondrial
1046629.Ssal_00039(PF01610)
1046629.Ssal_01039(PF13936)
1046629.Ssal_01150(PF13936)
1046629.Ssal_01932(PF01610)
1046629.Ssal_00995(PF13936)
1046629.Ssal_01238(PF13936)
1046629.Ssal_02110(PF13936)
1046629.Ssal_00895(PF13936)
1046629.Ssal_01691(PF01610)
1046629.Ssal_00336(PF01610)
1046629.Ssal_02124(PF13936)
1046629.Ssal_00680(PF01501)
1046629.Ssal_00682(PF01501)
1046629.Ssal_00688(PF01501)
1046629.Ssal_02075(PF13936)
1046629.Ssal_00690(PF01501)
1046629.Ssal_00208(PF01610)
1046629.Ssal_01997(PF01610)
1046629.Ssal_01166(PF01610)
1046629.Ssal_00540(PF01610)
1046629.Ssal_00544(PF13936)
1046629.Ssal_01370(PF01610)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================