Metamenu

Effective results for Streptococcus mutans UA159 (eggnog40)

Summary

Number of putative secreted proteins: 17
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 17 proteins (0 high, 17 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
210007.SMU_293(PF13787)ER
210007.SMU_836(PF05257)ER
210007.SMU_1678(PF08840)ER
210007.SMU_622c(PF13787)ER
210007.SMU_196c(PF05257)ER
210007.SMU_1378(PF13653)mitochondrial
210007.SMU_22(PF05257)ER
210007.SMU_39(PF13787)ER
210007.SMU_1505c(PF03147)not used
210007.SMU_633(PF08840)
210007.SMU_515(PF06100)
210007.SMU_1822(PF02938)
210007.SMU_984(PF05257)
210007.SMU_1510(PF03147)
210007.SMU_2101(PF02938)
210007.SMU_1584c(PF06100)
210007.SMU_367(PF05257)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================