Metamenu

Effective results for Bacillus subtilis subsp. subtilis str. 168 (eggnog40)

Summary

Number of putative secreted proteins: 215
- Predicted by T4SEpre: 243
- Predicted by EffectiveELD: 13 eukaryotic-like domains, contained in 24 proteins (1 high, 23 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
224308.Bsubs1_010100016531+PF04791ER
224308.Bsubs1_010100017961+mitochondrial
224308.Bsubs1_010100018271+(mitochondrial)
224308.Bsubs1_010100005956+ER
224308.Bsubs1_010100016976+(mitochondrial)
224308.Bsubs1_010100005038+ER
224308.Bsubs1_010100009016+ER
224308.Bsubs1_010100018006+ER
224308.Bsubs1_010100005561+ER
224308.Bsubs1_010100002428+ER
224308.Bsubs1_010100010126+ER
224308.Bsubs1_010100016986+mitochondrial
224308.Bsubs1_010100012546+(mitochondrial)
224308.Bsubs1_010100001003+ER
224308.Bsubs1_010100021536+ER
224308.Bsubs1_010100005168+ER
224308.Bsubs1_010100018176+ER
224308.Bsubs1_010100016686+ER
224308.Bsubs1_010100021431+(mitochondrial)
224308.Bsubs1_010100015501+(ER)
224308.Bsubs1_010100019316+(mitochondrial)
224308.Bsubs1_010100002803+ER
224308.Bsubs1_010100009041+ER
224308.Bsubs1_010100006581+ER
224308.Bsubs1_010100001918(PF14040)ER
224308.Bsubs1_010100014661+ER
224308.Bsubs1_010100014081(PF14040)ER
224308.Bsubs1_010100021791+ER
224308.Bsubs1_010100006736+ER
224308.Bsubs1_010100005621+ER
224308.Bsubs1_010100019211+(mitochondrial)
224308.Bsubs1_010100018521+ER
224308.Bsubs1_010100002833+(ER)
224308.Bsubs1_010100018966+ER
224308.Bsubs1_010100010276+ER
224308.Bsubs1_010100008146+ER
224308.Bsubs1_010100013501+mitochondrial
224308.Bsubs1_010100012371+ER
224308.Bsubs1_010100012736+ER
224308.Bsubs1_010100020726+ER
224308.Bsubs1_010100011816+ER
224308.Bsubs1_010100021101+(ER); ER
224308.Bsubs1_010100010366+ER
224308.Bsubs1_010100000125+ER
224308.Bsubs1_010100005536+ER; (ER)
224308.Bsubs1_010100021221+ER
224308.Bsubs1_010100018281+ER
224308.Bsubs1_010100010076+ER
224308.Bsubs1_010100015996(PF01687)(mitochondrial)
224308.Bsubs1_010100010651(PF08000)(plastid)
224308.Bsubs1_010100010221+(ER)
224308.Bsubs1_010100019756+(ER)
224308.Bsubs1_010100020661+(ER)
224308.Bsubs1_010100016681(PF12606)ER; not used
224308.Bsubs1_010100004088(PF03407)(mitochondrial)
224308.Bsubs1_010100003893+(mitochondrial)
224308.Bsubs1_010100016801+(ER)
224308.Bsubs1_010100013686+(ER)
224308.Bsubs1_010100012341+(ER)
224308.Bsubs1_010100001508+(PF05225)
224308.Bsubs1_010100009181+(PF01687)
224308.Bsubs1_010100001328+(ER)
224308.Bsubs1_010100013891+(mitochondrial)
224308.Bsubs1_010100014496+
224308.Bsubs1_010100006966+
224308.Bsubs1_010100011036+
224308.Bsubs1_010100000320+
224308.Bsubs1_010100016411+
224308.Bsubs1_010100007161(PF14748)
224308.Bsubs1_010100011626+
224308.Bsubs1_010100011821+
224308.Bsubs1_010100017076+
224308.Bsubs1_010100004973+
224308.Bsubs1_010100018866+
224308.Bsubs1_010100015846+
224308.Bsubs1_010100014001(PF14748)
224308.Bsubs1_010100000265+
224308.Bsubs1_010100004783+
224308.Bsubs1_010100011636+
224308.Bsubs1_010100011631+
224308.Bsubs1_010100012276+
224308.Bsubs1_010100016216+
224308.Bsubs1_010100020336+
224308.Bsubs1_010100004968+
224308.Bsubs1_010100018811+
224308.Bsubs1_010100015851+
224308.Bsubs1_010100014581(PF14552)
224308.Bsubs1_010100015451+
224308.Bsubs1_010100006236+
224308.Bsubs1_010100002693+
224308.Bsubs1_010100007021+
224308.Bsubs1_010100007431+
224308.Bsubs1_010100005801+
224308.Bsubs1_010100005976+
224308.Bsubs1_010100020851+
224308.Bsubs1_010100012181+
224308.Bsubs1_010100020041+
224308.Bsubs1_010100000195+
224308.Bsubs1_010100008676+
224308.Bsubs1_010100013756+
224308.Bsubs1_010100002173+
224308.Bsubs1_010100005906+
224308.Bsubs1_010100017341(PF10042)
224308.Bsubs1_010100017346(PF10042)
224308.Bsubs1_010100011341+
224308.Bsubs1_010100010086+
224308.Bsubs1_010100004803+
224308.Bsubs1_010100012051+
224308.Bsubs1_010100002828+
224308.Bsubs1_010100013121+
224308.Bsubs1_010100016826+
224308.Bsubs1_010100018821+
224308.Bsubs1_010100017061+
224308.Bsubs1_010100006481+
224308.Bsubs1_010100014316+
224308.Bsubs1_010100010786(PF14552)
224308.Bsubs1_010100002398+
224308.Bsubs1_010100006476+
224308.Bsubs1_010100010166+
224308.Bsubs1_010100016816+
224308.Bsubs1_010100003473+
224308.Bsubs1_010100009591+
224308.Bsubs1_010100003428+
224308.Bsubs1_010100011366+
224308.Bsubs1_010100018366(PF08000)
224308.Bsubs1_010100014251+
224308.Bsubs1_010100008086+
224308.Bsubs1_010100006816+
224308.Bsubs1_010100011951+
224308.Bsubs1_010100008956+
224308.Bsubs1_010100001233+
224308.Bsubs1_010100017316+
224308.Bsubs1_010100002593+
224308.Bsubs1_010100007926+
224308.Bsubs1_010100008431+
224308.Bsubs1_010100003433+
224308.Bsubs1_010100004098(PF03407)
224308.Bsubs1_010100016576+
224308.Bsubs1_010100019336+
224308.Bsubs1_010100016241+
224308.Bsubs1_010100011941+
224308.Bsubs1_010100017976+
224308.Bsubs1_010100018646+
224308.Bsubs1_010100009711+
224308.Bsubs1_010100017451+
224308.Bsubs1_010100007011+
224308.Bsubs1_010100012776+
224308.Bsubs1_010100020016+
224308.Bsubs1_010100018306+
224308.Bsubs1_010100013196+
224308.Bsubs1_010100015211+
224308.Bsubs1_010100016796+
224308.Bsubs1_010100011681+
224308.Bsubs1_010100016276+
224308.Bsubs1_010100021351+
224308.Bsubs1_010100005396+
224308.Bsubs1_010100013761+
224308.Bsubs1_010100005013+
224308.Bsubs1_010100010031+
224308.Bsubs1_010100009361+
224308.Bsubs1_010100021641+
224308.Bsubs1_010100003953(PF09224)
224308.Bsubs1_010100004543+
224308.Bsubs1_010100020511+
224308.Bsubs1_010100006636+
224308.Bsubs1_010100017211+
224308.Bsubs1_010100012756+
224308.Bsubs1_010100018986+
224308.Bsubs1_010100018981(PF16715)
224308.Bsubs1_010100001368+
224308.Bsubs1_010100010181(PF14748)
224308.Bsubs1_010100017851(PF14552)
224308.Bsubs1_010100019581+
224308.Bsubs1_010100008281+
224308.Bsubs1_010100012351+
224308.Bsubs1_010100020496+
224308.Bsubs1_010100009536+
224308.Bsubs1_010100021036+
224308.Bsubs1_010100013406+
224308.Bsubs1_010100007911+
224308.Bsubs1_010100016666+
224308.Bsubs1_010100015576+
224308.Bsubs1_010100020191+
224308.Bsubs1_010100009896+
224308.Bsubs1_010100006651+
224308.Bsubs1_010100014376+
224308.Bsubs1_010100002588+
224308.Bsubs1_010100011716+
224308.Bsubs1_010100002083+
224308.Bsubs1_010100014306+
224308.Bsubs1_010100009716+
224308.Bsubs1_010100010476+
224308.Bsubs1_010100014146+
224308.Bsubs1_010100013061(PF14748)
224308.Bsubs1_010100000933+
224308.Bsubs1_010100012741+
224308.Bsubs1_010100014381+
224308.Bsubs1_010100019496+
224308.Bsubs1_010100000655+
224308.Bsubs1_010100000010+
224308.Bsubs1_010100022126+
224308.Bsubs1_010100003478(PF08271)
224308.Bsubs1_010100004108+
224308.Bsubs1_010100006886(PF08000)
224308.Bsubs1_010100014771+
224308.Bsubs1_010100011656+
224308.Bsubs1_010100008876+
224308.Bsubs1_010100015471+
224308.Bsubs1_010100019646+
224308.Bsubs1_010100019641+
224308.Bsubs1_010100019621+
224308.Bsubs1_010100021986+
224308.Bsubs1_010100008901+
224308.Bsubs1_010100005941+
224308.Bsubs1_010100010976+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================