Effective results for Ehrlichia canis str. Jake (eggnog40)

Summary

Number of putative secreted proteins: 43
- Predicted by T4SEpre: 54
- Predicted by EffectiveELD: 1 eukaryotic-like domains, contained in 1 proteins (0 high, 1 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): Type IV

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
269484.Ecaj_0343+ER
269484.Ecaj_0151+ER
269484.Ecaj_0232+mitochondrial
269484.Ecaj_0716+ER
269484.Ecaj_0122+ER
269484.Ecaj_0404+ER
269484.Ecaj_0476(PF06455)ER
269484.Ecaj_0021+ER
269484.Ecaj_0531+ER
269484.Ecaj_0338+(mitochondrial)
269484.Ecaj_0925+(mitochondrial)
269484.Ecaj_0096+
269484.Ecaj_0638+
269484.Ecaj_0342+
269484.Ecaj_0799+
269484.Ecaj_0935+
269484.Ecaj_0016+
269484.Ecaj_0691+
269484.Ecaj_0271+
269484.Ecaj_0941+
269484.Ecaj_0004+
269484.Ecaj_0363+
269484.Ecaj_0434+
269484.Ecaj_0430+
269484.Ecaj_0431+
269484.Ecaj_0221+
269484.Ecaj_0220+
269484.Ecaj_0327+
269484.Ecaj_0047+
269484.Ecaj_0764+
269484.Ecaj_0762+
269484.Ecaj_0266+
269484.Ecaj_0268+
269484.Ecaj_0217+
269484.Ecaj_0071+
269484.Ecaj_0379+
269484.Ecaj_0784+
269484.Ecaj_0429+
269484.Ecaj_0428+
269484.Ecaj_0920+
269484.Ecaj_0930+
269484.Ecaj_0775+
269484.Ecaj_0027+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 1.3 (13/10 KEGG proteins)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================