Effective results for Lactococcus lactis subsp. lactis Il1403 (eggnog40)
Summary
Number of putative secreted proteins: 87
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 87 proteins (40 high, 47 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
272623.L0436 | PF13276 (PF00665) | (mitochondrial); (plastid) | |||
272623.L140080 | (PF13518) | (mitochondrial) | |||
272623.L111003 | (PF06736) | mitochondrial | |||
272623.L118350 | (PF06736) | ER | |||
272623.L0440 | PF13276 (PF00665) | (mitochondrial) | |||
272623.L122924 | (PF03644) | ER | |||
272623.L85237 | (PF06736) | ER | |||
272623.L174282 | (PF13518) | (mitochondrial) | |||
272623.L37953 | (PF13518) | (mitochondrial) | |||
272623.L72684 | (PF03960) | mitochondrial | |||
272623.L138554 | (PF13518) | (mitochondrial) | |||
272623.L158193 | (PF03960) | (mitochondrial); mitochondrial | |||
272623.L425 | (PF13518) | (mitochondrial) | |||
272623.L15267 | (PF03959) | ER | |||
272623.L0435 | PF13276 (PF00665) | (mitochondrial) | |||
272623.L0434 | PF13276 (PF00665) | (mitochondrial) | |||
272623.L0433 | PF13276 (PF00665) | (mitochondrial) | |||
272623.L0432 | PF13276 (PF00665) | (mitochondrial) | |||
272623.L0439 | PF13276 (PF00665) | (mitochondrial) | |||
272623.L142704 | (PF06736) | ER | |||
272623.L54580 | PF04103 | ER | |||
272623.L8702 | (PF06736) | ER; (ER) | |||
272623.L0472 | PF13276 (PF00665) | ||||
272623.L0471 | PF13276 (PF00665) | ||||
272623.L0470 | PF13276 (PF00665) | ||||
272623.L0457 | PF13276 (PF00665) | ||||
272623.L0459 | PF13276 (PF00665) | ||||
272623.L0458 | PF13276 (PF00665) | ||||
272623.L73853 | (PF03960) | (mitochondrial) | |||
272623.L28615 | (PF13518) | (mitochondrial) | |||
272623.L132585 | (PF03960) | (mitochondrial) | |||
272623.L862989 | (PF03960) | (mitochondrial) | |||
272623.L0438 | PF13276 (PF00665) | ||||
272623.L102972 | (PF06736) | (mitochondrial) | |||
272623.L0468 | PF13276 (PF00665) | ||||
272623.L0469 | PF13276 (PF00665) | ||||
272623.L0460 | PF13276 (PF00665) | ||||
272623.L0461 | PF13276 (PF00665) | ||||
272623.L0462 | PF13276 (PF00665) | ||||
272623.L0463 | PF13276 (PF00665) | ||||
272623.L0464 | PF13276 (PF00665) | ||||
272623.L0465 | PF13276 (PF00665) | ||||
272623.L0466 | PF13276 (PF00665) | ||||
272623.L0467 | PF13276 (PF00665) | ||||
272623.L131352 | (PF01527) | ||||
272623.L173048 | (PF01527) | ||||
272623.L21385 | (PF01527) | ||||
272623.L196017 | (PF03960) | ||||
272623.L54760 | (PF01527) | ||||
272623.L0446 | PF13936 | ||||
272623.L0447 | PF13936 | ||||
272623.L0444 | PF13936 | ||||
272623.L0445 | PF13936 | ||||
272623.L0443 | PF13936 | ||||
272623.L0448 | PF13936 | ||||
272623.L91907 | (PF01527) | ||||
272623.L0453 | PF13936 | ||||
272623.L0452 | PF13936 | ||||
272623.L0455 | PF13936 | ||||
272623.L0454 | PF13936 | ||||
272623.L0456 | PF13936 | ||||
272623.L93886 | (PF01527) | ||||
272623.L0451 | PF13936 | ||||
272623.L0450 | PF13936 | ||||
272623.L169709 | (PF13151) | ||||
272623.L186703 | (PF01527) | ||||
272623.L76013 | (PF01527) | ||||
272623.L0322 | (PF03306) | ||||
272623.L0321 | (PF03306) | ||||
272623.L200067 | (PF05495) | ||||
272623.L0007 | (PF00113) | ||||
272623.L0008 | (PF00113) | ||||
272623.L87010 | (PF01527) | ||||
272623.L36774 | (PF01527) | ||||
272623.L155471 | (PF01527) | ||||
272623.L145757 | (PF03960) | ||||
272623.L137335 | (PF01527) | ||||
272623.L140905 | (PF01527) | ||||
272623.L200025 | (PF00113) | not used | |||
272623.L199247 | (PF01527) | ||||
272623.L00457 | PF13936 | ||||
272623.L0449 | PF13936 | ||||
272623.L129005 | (PF01527) | ||||
272623.L16826 | (PF01527) | ||||
272623.L27434 | (PF01527) | ||||
272623.L49824 | (PF04098) | ||||
272623.L38510 | (PF01527) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)