Effective results for Mycoplasma bovis PG45 (eggnog40)

Summary

Number of putative secreted proteins: 42
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 42 proteins (5 high, 37 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
289397.MBOVPG45_0819PF07142ER
289397.MBOVPG45_0810PF07142ER
289397.MBOVPG45_0812PF07142ER
289397.MBOVPG45_0813PF07142ER
289397.MBOVPG45_0807PF07142ER
289397.MBOVPG45_0509(PF03382)ER
289397.MBOVPG45_0010(PF10437)(mitochondrial)
289397.MBOVPG45_0425(PF03382)ER
289397.MBOVPG45_0418(PF03382)ER
289397.MBOVPG45_0009(PF10437)(mitochondrial)
289397.MBOVPG45_0574(PF03382)(ER)
289397.MBOVPG45_0817(PF13936)
289397.MBOVPG45_0312(PF01609)
289397.MBOVPG45_0707(PF13936)
289397.MBOVPG45_0499(PF01609)
289397.MBOVPG45_0698(PF01609)
289397.MBOVPG45_0585(PF01609)
289397.MBOVPG45_0625(PF01609)
289397.MBOVPG45_0193(PF01609)
289397.MBOVPG45_0217(PF13936)
289397.MBOVPG45_0746(PF13936)
289397.MBOVPG45_0842(PF01609)
289397.MBOVPG45_0145(PF01609)
289397.MBOVPG45_0143(PF01609)
289397.MBOVPG45_0666(PF01609)
289397.MBOVPG45_0803(PF01609)
289397.MBOVPG45_0432(PF01609)
289397.MBOVPG45_0068(PF10437)
289397.MBOVPG45_0054(PF01609)
289397.MBOVPG45_0689(PF01609)
289397.MBOVPG45_0014(PF01609)
289397.MBOVPG45_0330(PF01609)
289397.MBOVPG45_0333(PF01633)
289397.MBOVPG45_0335(PF01633)
289397.MBOVPG45_0429(PF13936)
289397.MBOVPG45_0410(PF01609)
289397.MBOVPG45_0412(PF13936)
289397.MBOVPG45_0419(PF03382)
289397.MBOVPG45_0632(PF01609)
289397.MBOVPG45_0196(PF01609)
289397.MBOVPG45_0826(PF11074)
289397.MBOVPG45_0577(PF01609)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================