Metamenu

Effective results for Janibacter sp. HTCC2649 (eggnog40)

Summary

Number of putative secreted proteins: 24
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 24 proteins (1 high, 23 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
313589.JNB_06484(PF05572)ER
313589.JNB_06489(PF05572)ER
313589.JNB_06544(PF13653)ER
313589.JNB_05899(PF05572)ER
313589.JNB_17318(PF02371)mitochondrial
313589.JNB_19928(PF01082)ER
313589.JNB_18643(PF05076)mitochondrial; (mitochondrial)
313589.JNB_03980(PF04127)(ER); ER
313589.JNB_05235(PF02371)
313589.JNB_00890(PF13455)
313589.JNB_06339(PF05076)
313589.JNB_09314PF08213not used
313589.JNB_01200(PF02371)
313589.JNB_20183(PF12222)
313589.JNB_12903(PF02371)
313589.JNB_02990(PF02371)
313589.JNB_00110(PF04127)not used
313589.JNB_19263(PF02371)
313589.JNB_16978(PF02371)
313589.JNB_13153(PF02371)
313589.JNB_18293(PF05076)
313589.JNB_19153(PF02371)
313589.JNB_12768(PF02371)
313589.JNB_03570(PF02371)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================