Metamenu

Effective results for Thermosinus carboxydivorans Nor1 (eggnog40)

Summary

Number of putative secreted proteins: 88
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 88 proteins (11 high, 77 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
401526.TcarDRAFT_1402(PF02371)(mitochondrial)
401526.TcarDRAFT_0624(PF03483)(mitochondrial)
401526.TcarDRAFT_2266(PF00939)ER
401526.TcarDRAFT_1988(PF00939)ER
401526.TcarDRAFT_2277(PF13187)(mitochondrial)
401526.TcarDRAFT_0821(PF13187)(ER)
401526.TcarDRAFT_1699(PF13187) (PF02906)(plastid)
401526.TcarDRAFT_1831(PF01558) (PF17147) (PF01855)
401526.TcarDRAFT_1754(PF13187)mitochondrial
401526.TcarDRAFT_1226(PF13187)ER
401526.TcarDRAFT_1458(PF00939)ER
401526.TcarDRAFT_2715(PF00939)(ER)
401526.TcarDRAFT_1442(PF00939)ER
401526.TcarDRAFT_2030(PF16983)ER; (ER)
401526.TcarDRAFT_1144(PF17147) (PF01855)
401526.TcarDRAFT_1715(PF17147) (PF01855)
401526.TcarDRAFT_1177(PF05034) (PF07476)
401526.TcarDRAFT_1827PF09861(mitochondrial)
401526.TcarDRAFT_2224PF03727 PF00349
401526.TcarDRAFT_0272(PF17147) (PF01855)
401526.TcarDRAFT_0846(PF03266)(mitochondrial)
401526.TcarDRAFT_1854(PF17147) (PF01855)
401526.TcarDRAFT_2719(PF17147) (PF01855)
401526.TcarDRAFT_0412(PF13187) (PF02906)
401526.TcarDRAFT_2492(PF00939)(ER)
401526.TcarDRAFT_0770(PF02371)
401526.TcarDRAFT_2612(PF02371)
401526.TcarDRAFT_2721(PF01558)
401526.TcarDRAFT_1713(PF01558)
401526.TcarDRAFT_1884(PF02371)
401526.TcarDRAFT_2440PF09861
401526.TcarDRAFT_1187(PF03063)
401526.TcarDRAFT_2526PF09861
401526.TcarDRAFT_2291(PF03063)
401526.TcarDRAFT_2078(PF17125)
401526.TcarDRAFT_0565(PF13597)
401526.TcarDRAFT_1378(PF17125)
401526.TcarDRAFT_1379(PF06968)
401526.TcarDRAFT_0359(PF06968)
401526.TcarDRAFT_0005(PF02371)
401526.TcarDRAFT_0648PF09861
401526.TcarDRAFT_2463PF03670
401526.TcarDRAFT_1749(PF03063)
401526.TcarDRAFT_1744PF09861
401526.TcarDRAFT_0907(PF02371)not used
401526.TcarDRAFT_1692(PF02906)
401526.TcarDRAFT_1838(PF13187)
401526.TcarDRAFT_1530(PF01969)
401526.TcarDRAFT_0809(PF02906)
401526.TcarDRAFT_0069(PF02371)
401526.TcarDRAFT_0061(PF02371)not used
401526.TcarDRAFT_2316(PF02371)
401526.TcarDRAFT_2407(PF01969)
401526.TcarDRAFT_2223(PF02371)
401526.TcarDRAFT_2222(PF02371)
401526.TcarDRAFT_0251(PF02371)not used
401526.TcarDRAFT_0078(PF02371)not used
401526.TcarDRAFT_0862(PF02371)not used
401526.TcarDRAFT_1808(PF03483)
401526.TcarDRAFT_1809(PF03483)
401526.TcarDRAFT_0274(PF01558)
401526.TcarDRAFT_1903(PF06968)
401526.TcarDRAFT_0844(PF06968)
401526.TcarDRAFT_1863(PF03063)
401526.TcarDRAFT_0519(PF02371)not used
401526.TcarDRAFT_0983(PF02371)not used
401526.TcarDRAFT_1298(PF13187)
401526.TcarDRAFT_1295(PF13597)
401526.TcarDRAFT_1853(PF01558)
401526.TcarDRAFT_1852(PF02933)
401526.TcarDRAFT_1446(PF00939)
401526.TcarDRAFT_1110(PF06968)
401526.TcarDRAFT_1443PF09861
401526.TcarDRAFT_0407(PF00939)
401526.TcarDRAFT_0408(PF01558)
401526.TcarDRAFT_0084(PF02371)not used
401526.TcarDRAFT_2574(PF01558)
401526.TcarDRAFT_2570PF09861
401526.TcarDRAFT_2573(PF01855)
401526.TcarDRAFT_2028(PF13597)
401526.TcarDRAFT_1146(PF01558)
401526.TcarDRAFT_0415(PF02906)
401526.TcarDRAFT_0704PF00688
401526.TcarDRAFT_0702(PF02371)not used
401526.TcarDRAFT_2499(PF17125)
401526.TcarDRAFT_2032PF09861
401526.TcarDRAFT_1739(PF03483)
401526.TcarDRAFT_1342(PF02371)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================