Effective results for Bacillus selenitireducens MLS10 (eggnog40)

Summary

Number of putative secreted proteins: 32
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 7 eukaryotic-like domains, contained in 32 proteins (2 high, 30 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
439292.Bsel_0991				(PF00395) (PF16403)	ER
439292.Bsel_0866				(PF00395)	ER
439292.Bsel_2730				(PF03142)	ER
439292.Bsel_0819				(PF00395)	ER
439292.Bsel_0827				(PF00395)	ER
439292.Bsel_1067				(PF00395)	(mitochondrial)
439292.Bsel_0832				(PF00395)	ER
439292.Bsel_1010				(PF00395)	ER
439292.Bsel_0992				(PF00395)	ER
439292.Bsel_0993				(PF00395)	ER
439292.Bsel_3071				(PF00395)	ER
439292.Bsel_3072				(PF00395)	ER
439292.Bsel_3073				(PF00395)	ER
439292.Bsel_3069				(PF00395)	ER
439292.Bsel_0973				(PF00395)	ER
439292.Bsel_0813				(PF00395)	ER
439292.Bsel_3058				(PF00395)	ER
439292.Bsel_3057				(PF00395)	(ER)
439292.Bsel_0952				(PF00395)	ER
439292.Bsel_0953				(PF00395)	ER
439292.Bsel_0942				(PF00395)	ER
439292.Bsel_0948				(PF16403)	ER
439292.Bsel_0843				(PF00395)	ER
439292.Bsel_0844				(PF00395)	ER
439292.Bsel_0850				(PF16403) (PF00395)	(ER)
439292.Bsel_0822				(PF00395)
439292.Bsel_2385				(PF09419)
439292.Bsel_0810				(PF00395)
439292.Bsel_0917				(PF13911)
439292.Bsel_1935				PF06888
439292.Bsel_1066				(PF00395)
439292.Bsel_3009				PF05204

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================