Effective results for Ruegeria sp. R11 (eggnog40)
Summary
Number of putative secreted proteins: 36
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 10 eukaryotic-like domains, contained in 36 proteins (1 high, 35 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
439497.RR11_142 | (PF16350) (PF08669) | ER; (ER) | |||
439497.RR11_1052 | (PF16350) (PF08669) | (ER) | |||
439497.RR11_2615 | (PF16350) (PF08669) | ER | |||
439497.RR11_3440 | (PF08669) | (mitochondrial) | |||
439497.RR11_2179 | (PF13704) | (mitochondrial) | |||
439497.RR11_1101 | (PF16350) (PF08669) | ||||
439497.RR11_2998 | (PF16350) (PF08669) | ||||
439497.RR11_3173 | (PF02485) | (plastid) | |||
439497.RR11_2177 | (PF16350) (PF08669) | ||||
439497.RR11_1645 | (PF07366) | ||||
439497.RR11_80 | (PF08669) | ||||
439497.RR11_3082 | (PF07366) | ||||
439497.RR11_1644 | (PF08669) | ||||
439497.RR11_3389 | (PF08669) | ||||
439497.RR11_3060 | (PF07366) | ||||
439497.RR11_770 | (PF07366) | ||||
439497.RR11_2394 | (PF08669) | ||||
439497.RR11_3271 | (PF08669) | ||||
439497.RR11_1729 | (PF10013) | not used | |||
439497.RR11_3613 | (PF13704) | ||||
439497.RR11_2668 | (PF08669) | ||||
439497.RR11_2984 | (PF13704) | ||||
439497.RR11_1564 | (PF07366) | ||||
439497.RR11_2698 | (PF02485) | ||||
439497.RR11_1969 | (PF09585) | ||||
439497.RR11_2047 | (PF01755) | ||||
439497.RR11_413 | (PF09585) | ||||
439497.RR11_1206 | (PF13704) | ||||
439497.RR11_2494 | (PF01755) | ||||
439497.RR11_2491 | (PF02475) | ||||
439497.RR11_3165 | (PF13704) | ||||
439497.RR11_3169 | (PF13704) | ||||
439497.RR11_1928 | (PF07366) | ||||
439497.RR11_2315 | PF11781 | ||||
439497.RR11_215 | (PF01755) | ||||
439497.RR11_1124 | (PF13704) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)