Effective results for Fusobacterium mortiferum ATCC 9817 (eggnog40)

Summary

Number of putative secreted proteins: 68
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 15 eukaryotic-like domains, contained in 68 proteins (2 high, 66 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
469616.FMAG_00203				(PF02278) (PF08124)	ER
469616.FMAG_02367				(PF03553)	ER
469616.FMAG_01194				(PF03553)	ER
469616.FMAG_01195				(PF03553)	ER
469616.FMAG_01835				(PF01554)	ER
469616.FMAG_00491				(PF01554)	(ER); ER
469616.FMAG_01336				(PF01554)	(ER); ER
469616.FMAG_00312				(PF01554)	(mitochondrial)
469616.FMAG_01495				(PF00359)	mitochondrial
469616.FMAG_00979				(PF03553)	ER
469616.FMAG_00204				(PF02278)	ER
469616.FMAG_00422				(PF00359)	(mitochondrial)
469616.FMAG_00188				(PF03553)	ER
469616.FMAG_01676				(PF01554)	ER
469616.FMAG_01587				(PF01554)	(ER)
469616.FMAG_00526				(PF03553)	ER
469616.FMAG_02144				(PF01554)	(ER)
469616.FMAG_02263				(PF03553)	ER
469616.FMAG_02190				(PF01554)	(ER)
469616.FMAG_00034				(PF07650)	(mitochondrial)
469616.FMAG_02274				PF06176	(mitochondrial)
469616.FMAG_00645				(PF09820) (PF08011)
469616.FMAG_01526				(PF09820) (PF08011)
469616.FMAG_01528				(PF09820) (PF08011)
469616.FMAG_00440				(PF00359)	(ER)
469616.FMAG_00195				(PF02278) (PF08124)
469616.FMAG_01648				(PF01554)	(plastid)
469616.FMAG_01267				(PF09820) (PF08011)
469616.FMAG_01584				(PF09820) (PF08011)
469616.FMAG_00857				(PF01554)	(ER)
469616.FMAG_01282				(PF09820) (PF08011)
469616.FMAG_01283				(PF09820) (PF08011)
469616.FMAG_01284				(PF09820) (PF08011)
469616.FMAG_01124				(PF05034) (PF07476)
469616.FMAG_02498				(PF01554)	(ER)
469616.FMAG_00941				(PF01554)	(plastid)
469616.FMAG_02072				(PF09820) (PF08011)
469616.FMAG_00003				(PF02256)
469616.FMAG_02462				(PF00359)
469616.FMAG_02461				(PF00359)
469616.FMAG_02095				(PF07650)
469616.FMAG_01752				(PF13539)
469616.FMAG_00804				(PF03553)
469616.FMAG_00311				(PF01554)
469616.FMAG_00265				PF06176
469616.FMAG_00441				(PF00359)
469616.FMAG_00049				(PF01554)
469616.FMAG_02338				(PF07650)
469616.FMAG_02115				(PF01554)
469616.FMAG_01016				(PF00359)
469616.FMAG_01496				(PF00359)
469616.FMAG_01910				(PF01554)
469616.FMAG_00423				(PF00359)
469616.FMAG_01538				(PF13539)
469616.FMAG_02003				(PF01554)
469616.FMAG_01921				(PF00359)
469616.FMAG_01062				(PF02256)
469616.FMAG_00159				(PF00359)
469616.FMAG_02362				(PF00359)
469616.FMAG_02033				(PF00359)
469616.FMAG_02035				(PF00359)
469616.FMAG_00544				(PF13539)
469616.FMAG_00765				(PF02256)
469616.FMAG_00160				(PF00359)
469616.FMAG_00943				(PF03059)
469616.FMAG_02058				(PF04098)
469616.FMAG_01398				(PF00359)
469616.FMAG_01089				(PF00359)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================