Metamenu

Effective results for Candidatus Accumulibacter phosphatis clade IIA str. UW-1 (eggnog40)

Summary

Number of putative secreted proteins: 207
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 33 eukaryotic-like domains, contained in 207 proteins (53 high, 154 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
522306.CAP2UW1_2290(PF00665) PF13565(ER)
522306.CAP2UW1_1777(PF00665) PF13565(ER)
522306.CAP2UW1_0918(PF00665) PF13565(ER)
522306.CAP2UW1_2883(PF00656) (PF03781)ER
522306.CAP2UW1_2089(PF00665) PF13565(ER)
522306.CAP2UW1_1826(PF00656) (PF03781)ER
522306.CAP2UW1_1813(PF00665) PF13565(ER)
522306.CAP2UW1_0876(PF00665) PF13565(ER)
522306.CAP2UW1_2744(PF00665) PF13565(ER)
522306.CAP2UW1_1291(PF00665) PF13565(ER)
522306.CAP2UW1_4407(PF00665) PF13565(ER)
522306.CAP2UW1_1669(PF00665) PF13565(ER)
522306.CAP2UW1_1443(PF00665) PF13565(ER)
522306.CAP2UW1_4087(PF00665) PF13565(ER)
522306.CAP2UW1_0173(PF00665) PF13565(ER)
522306.CAP2UW1_1168PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_1160(PF11911)mitochondrial
522306.CAP2UW1_3729(PF00916)(ER)
522306.CAP2UW1_2850(PF00665)(mitochondrial)
522306.CAP2UW1_3104(PF03781)ER
522306.CAP2UW1_2278PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_1177(PF02810)(mitochondrial); mitochondrial
522306.CAP2UW1_0351(PF00665)(mitochondrial)
522306.CAP2UW1_1775PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_3208(PF13436)ER
522306.CAP2UW1_2080(PF13289)(mitochondrial)
522306.CAP2UW1_0344(PF02384)(mitochondrial)
522306.CAP2UW1_1691PF00688ER
522306.CAP2UW1_4300(PF13000)(mitochondrial)
522306.CAP2UW1_3315(PF08857)ER
522306.CAP2UW1_2227(PF17186)ER
522306.CAP2UW1_1324(PF00033)(mitochondrial); ER
522306.CAP2UW1_3513(PF00665)(mitochondrial)
522306.CAP2UW1_0681(PF13000)ER
522306.CAP2UW1_3243(PF16889)mitochondrial
522306.CAP2UW1_0862PF04862ER
522306.CAP2UW1_0861PF04862(ER)
522306.CAP2UW1_1308(PF14707)ER
522306.CAP2UW1_3885(PF13436)ER
522306.CAP2UW1_2747(PF00656)ER
522306.CAP2UW1_1310(PF14707)ER
522306.CAP2UW1_0197(PF14707)ER
522306.CAP2UW1_0195(PF01609)(mitochondrial)
522306.CAP2UW1_1910(PF01609)ER
522306.CAP2UW1_0518(PF00656)ER
522306.CAP2UW1_1480(PF00916)ER
522306.CAP2UW1_3515PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_2357(PF00656)ER
522306.CAP2UW1_1469PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_1077(PF00916)ER
522306.CAP2UW1_0181(PF00656)ER
522306.CAP2UW1_3163PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_0857(PF16889)mitochondrial
522306.CAP2UW1_1843(PF06293)mitochondrial
522306.CAP2UW1_1281(PF00916)ER; (ER)
522306.CAP2UW1_1447(PF00665)(mitochondrial)
522306.CAP2UW1_3117(PF01609)(ER)
522306.CAP2UW1_0091(PF00665)(mitochondrial)
522306.CAP2UW1_1940(PF00665)(mitochondrial)
522306.CAP2UW1_0140(PF01609)mitochondrial; (mitochondrial)
522306.CAP2UW1_3764(PF00665)(mitochondrial)
522306.CAP2UW1_0893(PF00656)ER
522306.CAP2UW1_4460(PF00916)(ER)
522306.CAP2UW1_4386(PF13271)ER
522306.CAP2UW1_0699(PF01609)ER
522306.CAP2UW1_0548(PF01609)ER
522306.CAP2UW1_3125(PF02384)(mitochondrial)
522306.CAP2UW1_1408(PF00656)ER
522306.CAP2UW1_1398(PF00194)ER
522306.CAP2UW1_1887PF03370(mitochondrial)
522306.CAP2UW1_0029(PF00656)ER
522306.CAP2UW1_1713PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_1718(PF00665)(mitochondrial)
522306.CAP2UW1_2997PF12762(mitochondrial); mitochondrial
522306.CAP2UW1_3158(PF00665)(ER)
522306.CAP2UW1_2069(PF00665)(mitochondrial)
522306.CAP2UW1_2075(PF13271) (PF02810)
522306.CAP2UW1_1772(PF01609)(mitochondrial)
522306.CAP2UW1_1348(PF00665) PF13565
522306.CAP2UW1_2094(PF00916)(ER)
522306.CAP2UW1_2208(PF13271) (PF13676)
522306.CAP2UW1_2320(PF03781) (PF13676)
522306.CAP2UW1_1868(PF13676)(plastid)
522306.CAP2UW1_0202(PF00665)(plastid)
522306.CAP2UW1_1912(PF00665) PF13565
522306.CAP2UW1_2486(PF03092)(mitochondrial)
522306.CAP2UW1_2153(PF00665)(plastid)
522306.CAP2UW1_3145(PF11911)(ER)
522306.CAP2UW1_3387(PF00665) PF13565
522306.CAP2UW1_1736(PF00916)(ER)
522306.CAP2UW1_4111(PF00665)
522306.CAP2UW1_2851(PF01695)
522306.CAP2UW1_2852(PF01609)
522306.CAP2UW1_1765(PF05189)
522306.CAP2UW1_2078(PF01927)
522306.CAP2UW1_0129(PF01609)
522306.CAP2UW1_3856PF12762
522306.CAP2UW1_0359(PF01609)
522306.CAP2UW1_0352(PF01695)
522306.CAP2UW1_0407(PF01609)
522306.CAP2UW1_4039(PF01502)
522306.CAP2UW1_3023(PF13676)
522306.CAP2UW1_4007(PF01609)
522306.CAP2UW1_1778PF13401
522306.CAP2UW1_3119(PF02810)
522306.CAP2UW1_0917PF13401
522306.CAP2UW1_1347PF13401
522306.CAP2UW1_3618(PF01695)
522306.CAP2UW1_1521(PF00916)
522306.CAP2UW1_2090PF13401
522306.CAP2UW1_0104(PF01609)
522306.CAP2UW1_0101(PF01609)
522306.CAP2UW1_3876PF12762
522306.CAP2UW1_1327(PF00033)
522306.CAP2UW1_1037(PF00665)
522306.CAP2UW1_1814PF13401
522306.CAP2UW1_0079PF13401
522306.CAP2UW1_3093(PF13676)
522306.CAP2UW1_3091(PF03781)
522306.CAP2UW1_3099(PF01927)
522306.CAP2UW1_3329(PF01609)
522306.CAP2UW1_2305(PF03781)
522306.CAP2UW1_0315(PF00033)
522306.CAP2UW1_1803(PF00665)
522306.CAP2UW1_1804(PF01695)
522306.CAP2UW1_3086(PF03781)
522306.CAP2UW1_2420(PF13676)
522306.CAP2UW1_2119(PF03781)
522306.CAP2UW1_0869(PF00665)
522306.CAP2UW1_0868(PF01695)
522306.CAP2UW1_1873(PF02384)
522306.CAP2UW1_3533(PF02810)
522306.CAP2UW1_3655PF14360
522306.CAP2UW1_4193(PF06293)
522306.CAP2UW1_4194(PF06293)
522306.CAP2UW1_2698(PF08857)
522306.CAP2UW1_2322(PF03781)not used
522306.CAP2UW1_2323(PF03781)
522306.CAP2UW1_2324(PF13676)
522306.CAP2UW1_0875PF13401
522306.CAP2UW1_3619(PF00665)
522306.CAP2UW1_2745PF13401
522306.CAP2UW1_1913PF13401
522306.CAP2UW1_4346(PF17186)
522306.CAP2UW1_3512(PF03781)
522306.CAP2UW1_1461(PF01609)
522306.CAP2UW1_1462PF12762
522306.CAP2UW1_1467(PF00665)
522306.CAP2UW1_3633(PF02810)
522306.CAP2UW1_1670PF13401
522306.CAP2UW1_2587(PF13289)
522306.CAP2UW1_3569(PF13676)
522306.CAP2UW1_0853(PF01609)
522306.CAP2UW1_1290PF13401
522306.CAP2UW1_1455(PF00665)
522306.CAP2UW1_1456(PF01695)
522306.CAP2UW1_4408PF13401
522306.CAP2UW1_1847(PF02810)
522306.CAP2UW1_1841(PF06293)
522306.CAP2UW1_0087(PF01695)
522306.CAP2UW1_0086(PF00665)
522306.CAP2UW1_2370(PF13281)
522306.CAP2UW1_2711(PF02384)
522306.CAP2UW1_2152(PF02384)
522306.CAP2UW1_1448(PF01695)
522306.CAP2UW1_1442PF13401
522306.CAP2UW1_1446(PF00665)
522306.CAP2UW1_1445(PF01695)
522306.CAP2UW1_0884(PF02384)
522306.CAP2UW1_4410(PF01695)
522306.CAP2UW1_0233(PF01609)
522306.CAP2UW1_4088PF13401
522306.CAP2UW1_0090(PF01695)
522306.CAP2UW1_0097(PF01609)
522306.CAP2UW1_0527(PF01695)
522306.CAP2UW1_0525(PF13676)
522306.CAP2UW1_0528(PF00665)
522306.CAP2UW1_3765(PF01695)
522306.CAP2UW1_2368(PF00656)
522306.CAP2UW1_4269(PF01502)
522306.CAP2UW1_3386PF13401
522306.CAP2UW1_0455(PF03781)
522306.CAP2UW1_1045(PF01609)
522306.CAP2UW1_1133(PF00656)
522306.CAP2UW1_0174PF13401
522306.CAP2UW1_0177(PF00656)
522306.CAP2UW1_0176(PF01609)
522306.CAP2UW1_0171(PF01609)
522306.CAP2UW1_1607(PF00194)
522306.CAP2UW1_4276PF13401
522306.CAP2UW1_1738(PF01609)
522306.CAP2UW1_2043(PF01609)
522306.CAP2UW1_2946(PF02384)
522306.CAP2UW1_3122(PF13289)
522306.CAP2UW1_1709(PF01609)
522306.CAP2UW1_1415PF13401
522306.CAP2UW1_4440(PF13289)
522306.CAP2UW1_1882(PF13289)
522306.CAP2UW1_0623PF13401
522306.CAP2UW1_0759(PF06293)
522306.CAP2UW1_4292(PF02384)
522306.CAP2UW1_1719(PF01695)
522306.CAP2UW1_2994(PF01502)
522306.CAP2UW1_2999(PF02810)
522306.CAP2UW1_2289PF13401
522306.CAP2UW1_3159PF13401
522306.CAP2UW1_2068(PF01695)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================