Metamenu

Effective results for Anaerococcus tetradius ATCC 35098 (eggnog40)

Summary

Number of putative secreted proteins: 26
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 12 eukaryotic-like domains, contained in 26 proteins (1 high, 25 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525255.HMPREF0077_0140(PF11070)(ER)
525255.HMPREF0077_1723(PF01813)mitochondrial
525255.HMPREF0077_0813(PF16199)ER
525255.HMPREF0077_0648(PF01131) PF02150(plastid)
525255.HMPREF0077_1696(PF01969)(plastid)
525255.HMPREF0077_1718(PF01991)
525255.HMPREF0077_1719(PF01992)
525255.HMPREF0077_1716(PF01496)
525255.HMPREF0077_0703(PF01131)not used
525255.HMPREF0077_0704(PF01131)
525255.HMPREF0077_1721(PF16886)
525255.HMPREF0077_1720(PF01990)
525255.HMPREF0077_1523(PF01131)not used
525255.HMPREF0077_0208(PF01813)
525255.HMPREF0077_0206(PF16886)
525255.HMPREF0077_0204(PF01990)
525255.HMPREF0077_0202(PF01496)
525255.HMPREF0077_0200(PF01992)
525255.HMPREF0077_1517(PF01131)not used
525255.HMPREF0077_0865(PF16199)
525255.HMPREF0077_1223(PF01131)
525255.HMPREF0077_0890(PF12646)
525255.HMPREF0077_0337(PF16199)
525255.HMPREF0077_1697(PF01969)
525255.HMPREF0077_2073(PF01131)not used
525255.HMPREF0077_2077(PF01131)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================