Effective results for Corynebacterium pseudogenitalium ATCC 33035 (eggnog40)
Summary
Number of putative secreted proteins: 61
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 14 eukaryotic-like domains, contained in 61 proteins (1 high, 60 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
525264.HMPREF0305_11935 | (PF00665) (PF13276) | mitochondrial | |||
525264.HMPREF0305_12349 | (PF00665) (PF13276) | mitochondrial | |||
525264.HMPREF0305_11718 | (PF00665) (PF13276) | (mitochondrial) | |||
525264.HMPREF0305_11668 | (PF11070) | ER | |||
525264.HMPREF0305_11563 | (PF00665) (PF13276) | (mitochondrial) | |||
525264.HMPREF0305_11548 | (PF01195) | ER | |||
525264.HMPREF0305_11104 | (PF00665) (PF13276) | (mitochondrial) | |||
525264.HMPREF0305_10207 | (PF13276) | (mitochondrial) | |||
525264.HMPREF0305_12236 | (PF13936) (PF00665) | (plastid) | |||
525264.HMPREF0305_10812 | (PF13936) (PF00665) | (plastid) | |||
525264.HMPREF0305_10629 | (PF13936) (PF00665) | ||||
525264.HMPREF0305_12424 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_11586 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_11589 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_11695 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_10503 | (PF13936) (PF00665) | ||||
525264.HMPREF0305_10869 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_11763 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_10054 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_12175 | (PF05277) | (ER) | |||
525264.HMPREF0305_12357 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_12184 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_12182 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_12434 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_12407 | (PF00665) (PF13276) | ||||
525264.HMPREF0305_11637 | (PF13936) (PF00665) | ||||
525264.HMPREF0305_11864 | (PF13936) (PF00665) | ||||
525264.HMPREF0305_11929 | (PF13936) (PF00665) | ||||
525264.HMPREF0305_11719 | (PF01527) | ||||
525264.HMPREF0305_11665 | (PF00665) | ||||
525264.HMPREF0305_11934 | (PF01527) | ||||
525264.HMPREF0305_12477 | PF02407 | ||||
525264.HMPREF0305_10635 | (PF14683) | ||||
525264.HMPREF0305_12425 | (PF01527) | ||||
525264.HMPREF0305_11587 | (PF01527) | ||||
525264.HMPREF0305_11588 | (PF01527) | ||||
525264.HMPREF0305_11103 | (PF01527) | ||||
525264.HMPREF0305_11694 | (PF01527) | ||||
525264.HMPREF0305_10614 | (PF01490) | ||||
525264.HMPREF0305_11568 | (PF13276) | ||||
525264.HMPREF0305_11564 | (PF01527) | ||||
525264.HMPREF0305_11167 | (PF09683) | ||||
525264.HMPREF0305_11762 | (PF01527) | ||||
525264.HMPREF0305_10092 | (PF03803) | ||||
525264.HMPREF0305_10098 | (PF05495) | ||||
525264.HMPREF0305_11574 | (PF01195) | ||||
525264.HMPREF0305_11556 | (PF13276) | ||||
525264.HMPREF0305_10594 | (PF14078) | ||||
525264.HMPREF0305_10220 | (PF00665) | ||||
525264.HMPREF0305_12356 | (PF01527) | ||||
525264.HMPREF0305_12350 | (PF01527) | ||||
525264.HMPREF0305_11530 | (PF00665) | ||||
525264.HMPREF0305_12185 | (PF01527) | ||||
525264.HMPREF0305_12183 | (PF01527) | ||||
525264.HMPREF0305_12433 | (PF01527) | ||||
525264.HMPREF0305_10870 | (PF01527) | ||||
525264.HMPREF0305_12401 | (PF01527) | ||||
525264.HMPREF0305_12402 | (PF00665) | ||||
525264.HMPREF0305_12406 | (PF01527) | ||||
525264.HMPREF0305_11268 | (PF14078) | ||||
525264.HMPREF0305_11078 | (PF01527) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)