Metamenu

Effective results for Finegoldia magna ATCC 53516 (eggnog40)

Summary

Number of putative secreted proteins: 65
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 65 proteins (14 high, 51 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
525282.HMPREF0391_11042(PF11070)ER
525282.HMPREF0391_11815(PF01813)mitochondrial
525282.HMPREF0391_10017(PF05738)mitochondrial
525282.HMPREF0391_10258(PF00112)ER
525282.HMPREF0391_10257(PF00112)ER
525282.HMPREF0391_10243(PF05738)ER
525282.HMPREF0391_10241(PF05738)ER
525282.HMPREF0391_10766(PF06280)(ER)
525282.HMPREF0391_10762PF13518mitochondrial
525282.HMPREF0391_10591(PF00112)ER
525282.HMPREF0391_11082(PF06280)ER
525282.HMPREF0391_11081(PF05738)ER
525282.HMPREF0391_10783PF13518(mitochondrial)
525282.HMPREF0391_10092PF13518(mitochondrial)
525282.HMPREF0391_11328PF13518(mitochondrial)
525282.HMPREF0391_11661PF13518(mitochondrial)
525282.HMPREF0391_10998PF13518(mitochondrial)
525282.HMPREF0391_10802PF13518(mitochondrial)
525282.HMPREF0391_10825PF13518(mitochondrial)
525282.HMPREF0391_11099PF13518
525282.HMPREF0391_11238(PF16199)
525282.HMPREF0391_10972(PF14512)
525282.HMPREF0391_10795(PF13936)
525282.HMPREF0391_10899(PF00872)
525282.HMPREF0391_11611(PF13936)
525282.HMPREF0391_10094(PF00872)
525282.HMPREF0391_10512(PF00872)
525282.HMPREF0391_10313(PF01813)
525282.HMPREF0391_10315(PF16886)
525282.HMPREF0391_10317(PF01990)
525282.HMPREF0391_10319(PF01496)
525282.HMPREF0391_10081(PF13936)
525282.HMPREF0391_10320(PF01992)
525282.HMPREF0391_10322(PF13936)
525282.HMPREF0391_10996(PF00872)
525282.HMPREF0391_10337(PF00872)
525282.HMPREF0391_11069PF13518
525282.HMPREF0391_10511(PF00872)
525282.HMPREF0391_11592(PF16199)
525282.HMPREF0391_10295(PF16199)
525282.HMPREF0391_11102(PF00872)
525282.HMPREF0391_11651(PF13936)
525282.HMPREF0391_11820(PF01991)
525282.HMPREF0391_11822(PF01496)
525282.HMPREF0391_10472(PF06777)
525282.HMPREF0391_10010(PF00872)
525282.HMPREF0391_11704(PF00872)
525282.HMPREF0391_11705(PF00872)
525282.HMPREF0391_11389(PF14512)
525282.HMPREF0391_10491PF13518
525282.HMPREF0391_11818(PF01990)
525282.HMPREF0391_11819(PF01992)
525282.HMPREF0391_11817(PF16886)
525282.HMPREF0391_10487(PF12646)
525282.HMPREF0391_10925(PF00872)
525282.HMPREF0391_10240(PF05738)
525282.HMPREF0391_10026PF13518
525282.HMPREF0391_11196(PF00872)
525282.HMPREF0391_10116(PF13936)
525282.HMPREF0391_10231(PF00872)
525282.HMPREF0391_11189PF13518
525282.HMPREF0391_10765(PF00872)
525282.HMPREF0391_10764(PF00872)
525282.HMPREF0391_10827(PF00872)
525282.HMPREF0391_10573PF13518

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================