Metamenu

Effective results for Gemella morbillorum M424 (eggnog40)

Summary

Number of putative secreted proteins: 13
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 4 eukaryotic-like domains, contained in 13 proteins (0 high, 13 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
562982.HMPREF0432_00463(PF13529)ER
562982.HMPREF0432_01372(PF13529)ER
562982.HMPREF0432_01374(PF13529)ER
562982.HMPREF0432_00172(PF13529)ER
562982.HMPREF0432_00991(PF13529)ER
562982.HMPREF0432_01352(PF04991)(ER)
562982.HMPREF0432_01354(PF04991)(ER); (mitochondrial)
562982.HMPREF0432_01355(PF04991)mitochondrial
562982.HMPREF0432_01569(PF00308)
562982.HMPREF0432_01544(PF00308)
562982.HMPREF0432_00724(PF00308)
562982.HMPREF0432_01492(PF00610)
562982.HMPREF0432_00003(PF00308)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================