Metamenu

Effective results for Enterococcus faecium C68 (eggnog40)

Summary

Number of putative secreted proteins: 74
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 74 proteins (13 high, 61 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
565664.EFXG_02196(PF01131) (PF01751)(mitochondrial)
565664.EFXG_01992PF05738ER
565664.EFXG_02323PF05738ER
565664.EFXG_02441PF05738ER; (ER)
565664.EFXG_02530PF05738ER
565664.EFXG_01573(PF00359)mitochondrial
565664.EFXG_01292(PF00367)ER
565664.EFXG_01414PF05738ER
565664.EFXG_02820(PF09683)ER
565664.EFXG_02222PF05738ER
565664.EFXG_01413PF05738ER
565664.EFXG_00143(PF00139)ER
565664.EFXG_00425(PF00359)(ER)
565664.EFXG_02347PF05738ER
565664.EFXG_01273PF05738ER
565664.EFXG_01029(PF00847)(mitochondrial)
565664.EFXG_02259(PF00367)ER
565664.EFXG_00388(PF00367)ER
565664.EFXG_01638(PF16875) (PF16874)
565664.EFXG_01747(PF00186)(mitochondrial)
565664.EFXG_02521(PF01131) (PF01751)
565664.EFXG_00417(PF00359)(ER)
565664.EFXG_00091(PF00253)(mitochondrial)
565664.EFXG_01583(PF16875) (PF16874)
565664.EFXG_02353(PF00359)(mitochondrial)
565664.EFXG_02297(PF01131) (PF01751)
565664.EFXG_00504(PF01131) (PF01751)
565664.EFXG_01497(PF01131) (PF01751)
565664.EFXG_00262(PF16875) (PF16874)
565664.EFXG_01398(PF01131) (PF01751)
565664.EFXG_01024(PF11175)(mitochondrial)
565664.EFXG_00945(PF00367)
565664.EFXG_02267(PF00367)
565664.EFXG_02515(PF00186)
565664.EFXG_00739(PF00367)
565664.EFXG_00367(PF00367)
565664.EFXG_01970(PF01751)
565664.EFXG_00022(PF01751)
565664.EFXG_00202(PF00253)
565664.EFXG_01408(PF00359)
565664.EFXG_00978(PF00367)
565664.EFXG_02834(PF02275)
565664.EFXG_00161(PF00367)
565664.EFXG_00418(PF00359)
565664.EFXG_01415PF05738
565664.EFXG_01227(PF00253)
565664.EFXG_02567(PF06414)
565664.EFXG_02020(PF00359)
565664.EFXG_02486(PF00367)
565664.EFXG_00337(PF00367)
565664.EFXG_02019(PF00359)
565664.EFXG_02015(PF00359)
565664.EFXG_02348PF05738
565664.EFXG_02749(PF00958)
565664.EFXG_02490(PF00367)
565664.EFXG_01580(PF00367)
565664.EFXG_01266(PF06414)
565664.EFXG_02619PF05738
565664.EFXG_02617PF05738
565664.EFXG_00054(PF00958)
565664.EFXG_00291(PF00359)
565664.EFXG_00290(PF00359)
565664.EFXG_02282(PF00359)
565664.EFXG_02281(PF00359)
565664.EFXG_00513(PF01751)
565664.EFXG_00283(PF11175)
565664.EFXG_02412(PF00367)
565664.EFXG_00708(PF05704)
565664.EFXG_01650(PF00359)
565664.EFXG_00491(PF00186)
565664.EFXG_01038(PF00359)
565664.EFXG_00399(PF00359)
565664.EFXG_01751(PF02275)
565664.EFXG_01752(PF02275)not used

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================