Effective results for Mobiluncus mulieris 28-1 (eggnog40)

Summary

Number of putative secreted proteins: 22
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 22 proteins (16 high, 6 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
596328.HMPREF0578_1275				(PF07479) (PF01210)	ER
596328.HMPREF0578_1933				(PF07479) (PF01210)	(ER)
596328.HMPREF0578_1332				PF13173	(mitochondrial); mitochondrial
596328.HMPREF0578_1571				(PF07479) (PF01210)	(ER)
596328.HMPREF0578_1836				PF13173	mitochondrial
596328.HMPREF0578_1415				PF13173	ER
596328.HMPREF0578_0456				PF13173	(mitochondrial)
596328.HMPREF0578_0513				PF13173	(mitochondrial)
596328.HMPREF0578_1840				(PF03423)
596328.HMPREF0578_1023				PF13173
596328.HMPREF0578_1164				PF13173
596328.HMPREF0578_0982				PF04587
596328.HMPREF0578_1794				PF13173
596328.HMPREF0578_1355				PF13173
596328.HMPREF0578_0718				PF13173
596328.HMPREF0578_2001				PF13173
596328.HMPREF0578_0526				PF13173
596328.HMPREF0578_1924				PF13173
596328.HMPREF0578_1331				PF13173
596328.HMPREF0578_0843				(PF00958)
596328.HMPREF0578_1192				PF13173
596328.HMPREF0578_0482				(PF00958)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================