Effective results for Olsenella uli DSM 7084 (eggnog40)

Summary

Number of putative secreted proteins: 32
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 32 proteins (1 high, 31 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

Protein	EffectiveT3	EffectiveCCBD	T4SEpre	EffectiveELD	Predotar
633147.Olsu_1511				(PF02361)	ER
633147.Olsu_0542				(PF05738)	ER
633147.Olsu_1578				(PF02361)	(ER)
633147.Olsu_0292				(PF05738)	ER
633147.Olsu_1477				(PF02361)	ER
633147.Olsu_0359				PF12873	(mitochondrial)
633147.Olsu_1030				(PF01228) (PF02901)
633147.Olsu_1558				(PF02361)	(plastid)
633147.Olsu_0297				(PF01228) (PF02901)
633147.Olsu_0291				(PF05738)	(plastid)
633147.Olsu_0219				(PF02361)	(mitochondrial)
633147.Olsu_0306				(PF01228) (PF02901)
633147.Olsu_1202				(PF01228) (PF02901)
633147.Olsu_0124				(PF01228) (PF02901)
633147.Olsu_1247				(PF03437)
633147.Olsu_0591				(PF04991)
633147.Olsu_0112				(PF01116)
633147.Olsu_0585				(PF04991)
633147.Olsu_0771				(PF05738)
633147.Olsu_0481				(PF02361)
633147.Olsu_1398				(PF03437)
633147.Olsu_0537				(PF01116)
633147.Olsu_0707				(PF05738)
633147.Olsu_1554				(PF02873)
633147.Olsu_0063				(PF01116)
633147.Olsu_0404				(PF01116)
633147.Olsu_0672				(PF01116)
633147.Olsu_0609				(PF04991)
633147.Olsu_0259				(PF02361)
633147.Olsu_1096				(PF02873)
633147.Olsu_0224				(PF02361)
633147.Olsu_0682				(PF01116)

Detailed merged results for each protein sequence

• Detailed merged results as table (merge_results.html)
• Detailed merged results as tab delimited file (merge_results.csv)

Individual results for each protein sequence

• EffectiveELD predictions (PROTEINS.ELD.TXT)
• Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
• Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)

Genome based results

Summary

• Gram negative: NO (FDR = 0.5 %)
• Functional Type III secretion system: N.D.
• Functional Type IV secretion system: NO (FDR = 7.2 %)
• Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================