Metamenu

Effective results for Arcanobacterium haemolyticum DSM 20595 (eggnog40)

Summary

Number of putative secreted proteins: 19
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 5 eukaryotic-like domains, contained in 19 proteins (0 high, 19 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
644284.Arch_1570(PF13276)mitochondrial
644284.Arch_1143(PF00950)ER
644284.Arch_0423(PF11070)ER
644284.Arch_1196(PF13276)mitochondrial
644284.Arch_0689(PF00950)ER
644284.Arch_1648(PF13276)mitochondrial
644284.Arch_0786(PF13276)mitochondrial
644284.Arch_0784(PF13276)(ER)
644284.Arch_1780(PF13276)mitochondrial
644284.Arch_0793(PF13276)mitochondrial
644284.Arch_0145(PF00950)ER
644284.Arch_1450(PF00102)(plastid)
644284.Arch_0144(PF00950)(plastid)
644284.Arch_0091(PF13276)
644284.Arch_0507(PF13276)
644284.Arch_1798(PF03644)
644284.Arch_1208(PF13276)
644284.Arch_0811(PF00950)
644284.Arch_0482(PF00950)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================