Metamenu

Effective results for Streptococcus anginosus F0211 (eggnog40)

Summary

Number of putative secreted proteins: 116
- Predicted by T4SEpre: 97
- Predicted by EffectiveELD: 12 eukaryotic-like domains, contained in 42 proteins (3 high, 39 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
706437.HMPREF0813_01336+ER
706437.HMPREF0813_00555+ER
706437.HMPREF0813_00796+ER
706437.HMPREF0813_01789(PF03714)(mitochondrial)
706437.HMPREF0813_00785+ER
706437.HMPREF0813_00949(PF05738)ER
706437.HMPREF0813_00768+mitochondrial
706437.HMPREF0813_00169+(ER)
706437.HMPREF0813_01605+(mitochondrial)
706437.HMPREF0813_01221+ER
706437.HMPREF0813_01178(PF05257)ER
706437.HMPREF0813_00976+(mitochondrial)
706437.HMPREF0813_00988(PF05738)ER
706437.HMPREF0813_00510(PF05738)ER
706437.HMPREF0813_01298+mitochondrial
706437.HMPREF0813_00539+ER
706437.HMPREF0813_01627+(mitochondrial)
706437.HMPREF0813_01623(PF05738)ER
706437.HMPREF0813_00257PF02916ER
706437.HMPREF0813_01630+ER
706437.HMPREF0813_01939(PF03577)ER
706437.HMPREF0813_00674+ER
706437.HMPREF0813_01676+(ER); ER
706437.HMPREF0813_00270+(ER)
706437.HMPREF0813_01089(PF03714)mitochondrial
706437.HMPREF0813_01082(PF08282)(mitochondrial)
706437.HMPREF0813_00595(PF03577)ER
706437.HMPREF0813_00624+ER
706437.HMPREF0813_00822+ER
706437.HMPREF0813_01981(PF05257)ER
706437.HMPREF0813_00635(PF12746)(mitochondrial)
706437.HMPREF0813_01549(PF05738)ER
706437.HMPREF0813_01190(PF05257)(mitochondrial); mitochondrial
706437.HMPREF0813_00156+ER
706437.HMPREF0813_01855+ER
706437.HMPREF0813_01209+(plastid)
706437.HMPREF0813_00027(PF08282)plastid
706437.HMPREF0813_01070+(mitochondrial)
706437.HMPREF0813_00824(PF05257)(mitochondrial)
706437.HMPREF0813_00634(PF12746)(ER); not used
706437.HMPREF0813_01043+(plastid)
706437.HMPREF0813_01142+
706437.HMPREF0813_00038+
706437.HMPREF0813_00924(PF08282)
706437.HMPREF0813_00490+
706437.HMPREF0813_01200(PF02938)
706437.HMPREF0813_01339+
706437.HMPREF0813_00318(PF02938)
706437.HMPREF0813_00001(PF08282)
706437.HMPREF0813_00954+
706437.HMPREF0813_00177+
706437.HMPREF0813_01168+
706437.HMPREF0813_00764(PF08282)
706437.HMPREF0813_01698+
706437.HMPREF0813_01958+
706437.HMPREF0813_00575(PF08282)
706437.HMPREF0813_00996+
706437.HMPREF0813_01483+
706437.HMPREF0813_01968PF12873
706437.HMPREF0813_01967PF12873
706437.HMPREF0813_01106(PF09359)
706437.HMPREF0813_01563+
706437.HMPREF0813_00566(PF08282)
706437.HMPREF0813_01582+
706437.HMPREF0813_01557+
706437.HMPREF0813_00186(PF08282)
706437.HMPREF0813_00187(PF08282)
706437.HMPREF0813_00739+
706437.HMPREF0813_00354(PF08282)
706437.HMPREF0813_00350(PF09359)
706437.HMPREF0813_00082+
706437.HMPREF0813_02060+
706437.HMPREF0813_01929+
706437.HMPREF0813_00506+
706437.HMPREF0813_00724+
706437.HMPREF0813_00659+
706437.HMPREF0813_00316+
706437.HMPREF0813_01136+
706437.HMPREF0813_00245(PF05704)
706437.HMPREF0813_00719+
706437.HMPREF0813_01045+
706437.HMPREF0813_01380+
706437.HMPREF0813_01384+
706437.HMPREF0813_01722+
706437.HMPREF0813_00526+
706437.HMPREF0813_00091+
706437.HMPREF0813_00094(PF09731)
706437.HMPREF0813_01654+
706437.HMPREF0813_02014+
706437.HMPREF0813_01396+
706437.HMPREF0813_01421+
706437.HMPREF0813_00268+
706437.HMPREF0813_01010(PF03577)
706437.HMPREF0813_01065+
706437.HMPREF0813_01090+
706437.HMPREF0813_00076(PF05257)
706437.HMPREF0813_00077+
706437.HMPREF0813_00850+
706437.HMPREF0813_01087+
706437.HMPREF0813_01063(PF08282)
706437.HMPREF0813_00130+
706437.HMPREF0813_00138(PF08282)
706437.HMPREF0813_02017+
706437.HMPREF0813_01870+
706437.HMPREF0813_01509+
706437.HMPREF0813_00900+
706437.HMPREF0813_00633(PF12746)not used
706437.HMPREF0813_00338(PF08282)
706437.HMPREF0813_00026(PF08282)not used
706437.HMPREF0813_01683+
706437.HMPREF0813_00931+
706437.HMPREF0813_00150+
706437.HMPREF0813_01551+
706437.HMPREF0813_01039(PF08282)
706437.HMPREF0813_01459+
706437.HMPREF0813_01454+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================