Metamenu

Effective results for Mycoplasma putrefaciens KS1 (eggnog40)

Summary

Number of putative secreted proteins: 15
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 3 eukaryotic-like domains, contained in 15 proteins (13 high, 2 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
743965.MPUT_0239PF03382ER; (ER)
743965.MPUT_0363PF03382ER
743965.MPUT_0708PF03382ER
743965.MPUT_0237PF03382ER; (ER)
743965.MPUT_0371PF03382ER
743965.MPUT_0636(PF03959)
743965.MPUT_0531PF03382
743965.MPUT_0534PF03382
743965.MPUT_0236PF03382
743965.MPUT_0227PF03382
743965.MPUT_0226PF03382
743965.MPUT_0229PF03382
743965.MPUT_0388PF03382
743965.MPUT_0312(PF11074)
743965.MPUT_0641PF03382

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================