Effective results for Brachyspira pilosicoli 95/1000 (eggnog40)
Summary
Number of putative secreted proteins: 72
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 18 eukaryotic-like domains, contained in 72 proteins (32 high, 40 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None
Protein based results
Putative secreted proteins (weak evidence indicated by parentheses)
Protein | EffectiveT3 | EffectiveCCBD | T4SEpre | EffectiveELD | Predotar |
---|---|---|---|---|---|
759914.BP951000_0732 | PF12796 PF00023 PF13857 | ER | |||
759914.BP951000_1937 | PF12796 PF00023 PF13857 | ER | |||
759914.BP951000_0852 | PF12796 PF13606 PF13857 | ER | |||
759914.BP951000_1228 | PF12796 PF13606 PF00023 | ER | |||
759914.BP951000_2003 | PF12796 (PF13637) | ER | |||
759914.BP951000_2007 | PF12796 PF13857 | ER | |||
759914.BP951000_1608 | PF12796 PF13606 | ER | |||
759914.BP951000_0080 | (PF13637) PF13857 | ER | |||
759914.BP951000_1176 | PF12796 (PF13637) PF00023 PF13857 | ||||
759914.BP951000_0165 | PF12796 PF00023 | ER | |||
759914.BP951000_1438 | PF12796 (PF13637) | ER | |||
759914.BP951000_1433 | PF12796 PF13857 | ER; (ER) | |||
759914.BP951000_0353 | PF12796 PF00023 | ER | |||
759914.BP951000_0703 | PF12796 | ER | |||
759914.BP951000_2251 | (PF05154) | ER | |||
759914.BP951000_2245 | (PF01442) | (ER) | |||
759914.BP951000_2240 | (PF02224) | (mitochondrial); plastid | |||
759914.BP951000_1831 | (PF13174) | ER | |||
759914.BP951000_0514 | (PF05154) | ER | |||
759914.BP951000_1938 | PF12796 | ER | |||
759914.BP951000_1925 | (PF13174) | ER | |||
759914.BP951000_2218 | PF12796 PF00023 | (mitochondrial) | |||
759914.BP951000_0943 | (PF06803) | (mitochondrial) | |||
759914.BP951000_0018 | (PF03724) | ER | |||
759914.BP951000_1161 | (PF13306) | ER | |||
759914.BP951000_0489 | PF12796 | ER | |||
759914.BP951000_0488 | PF00023 | ER | |||
759914.BP951000_2316 | PF12796 | ER | |||
759914.BP951000_0226 | PF12796 | ER | |||
759914.BP951000_0179 | PF12796 | ER | |||
759914.BP951000_0170 | PF12796 | ER | |||
759914.BP951000_1365 | PF12796 | (ER) | |||
759914.BP951000_2054 | (PF13306) | ER | |||
759914.BP951000_2050 | (PF13306) | ER | |||
759914.BP951000_2051 | (PF13306) | ER | |||
759914.BP951000_2052 | (PF13306) | ER | |||
759914.BP951000_2053 | (PF13306) | ER | |||
759914.BP951000_0977 | (PF13306) | ER | |||
759914.BP951000_0976 | (PF13306) | ER | |||
759914.BP951000_0978 | (PF13306) | ER | |||
759914.BP951000_0740 | (PF05154) | ER | |||
759914.BP951000_0125 | PF12796 | ER | |||
759914.BP951000_1432 | PF12796 | ER | |||
759914.BP951000_0352 | (PF03724) | ER | |||
759914.BP951000_0435 | PF12796 | ER | |||
759914.BP951000_0433 | PF12796 | ER | |||
759914.BP951000_0089 | (PF16314) | (ER) | |||
759914.BP951000_0081 | (PF06803) | (ER) | |||
759914.BP951000_0215 | PF12796 PF00023 | ||||
759914.BP951000_0032 | PF12796 PF13606 | ||||
759914.BP951000_0017 | (PF03724) | (plastid) | |||
759914.BP951000_2121 | (PF13174) | ||||
759914.BP951000_2253 | PF12796 | ||||
759914.BP951000_2034 | (PF03243) | not used | |||
759914.BP951000_2035 | (PF03243) | ||||
759914.BP951000_0075 | (PF03724) | ||||
759914.BP951000_1918 | (PF01195) | ||||
759914.BP951000_1917 | (PF01195) | ||||
759914.BP951000_0063 | PF12796 | ||||
759914.BP951000_2239 | (PF02224) | not used | |||
759914.BP951000_0267 | (PF06241) | ||||
759914.BP951000_0457 | (PF13174) | ||||
759914.BP951000_0204 | (PF13174) | ||||
759914.BP951000_1307 | (PF13174) | ||||
759914.BP951000_1757 | (PF06803) | ||||
759914.BP951000_0571 | (PF02485) | ||||
759914.BP951000_0570 | (PF02485) | ||||
759914.BP951000_2330 | PF12796 | ||||
759914.BP951000_1235 | (PF01531) | ||||
759914.BP951000_1232 | (PF01531) | ||||
759914.BP951000_2296 | (PF01531) | ||||
759914.BP951000_0921 | (PF06803) |
Detailed merged results for each protein sequence
- Detailed merged results as table (merge_results.html)
- Detailed merged results as tab delimited file (merge_results.csv)
Individual results for each protein sequence
- EffectiveELD predictions (PROTEINS.ELD.TXT)
- Predotar predictions using animal/human model (Predotar_output_modelANIMAL.TXT)
- Predotar predictions using plant model (Predotar_output_modelPLANT.TXT)