Metamenu

Effective results for Streptococcus sp. oral taxon 071 str. 73H25AP (eggnog40)

Summary

Number of putative secreted proteins: 94
- Predicted by T4SEpre: 95
- Predicted by EffectiveELD: 11 eukaryotic-like domains, contained in 17 proteins (3 high, 14 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type IV)

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
864570.HMPREF9189_1138+ER
864570.HMPREF9189_0990+ER
864570.HMPREF9189_0843+ER
864570.HMPREF9189_0845+ER
864570.HMPREF9189_0284+(ER)
864570.HMPREF9189_1721(PF05257)ER
864570.HMPREF9189_0885+ER
864570.HMPREF9189_0897+ER
864570.HMPREF9189_0890+ER
864570.HMPREF9189_0139(PF03644)(mitochondrial)
864570.HMPREF9189_0306+ER
864570.HMPREF9189_0417+ER
864570.HMPREF9189_1433+ER
864570.HMPREF9189_1746+mitochondrial; (mitochondrial)
864570.HMPREF9189_1677+mitochondrial
864570.HMPREF9189_1757+ER
864570.HMPREF9189_1625+ER
864570.HMPREF9189_0383(PF05257)ER
864570.HMPREF9189_0559(PF04991)(ER)
864570.HMPREF9189_1398+ER
864570.HMPREF9189_1058+ER
864570.HMPREF9189_1456+PF04103
864570.HMPREF9189_0075+PF00910
864570.HMPREF9189_1115+(mitochondrial)
864570.HMPREF9189_1698+(PF05257)
864570.HMPREF9189_1478+(ER)
864570.HMPREF9189_1409(PF05704)(mitochondrial)
864570.HMPREF9189_1628(PF09683)(plastid)
864570.HMPREF9189_0047+(mitochondrial)
864570.HMPREF9189_1231+
864570.HMPREF9189_0151+
864570.HMPREF9189_1719+
864570.HMPREF9189_0198+
864570.HMPREF9189_1856+
864570.HMPREF9189_1726+
864570.HMPREF9189_0457+
864570.HMPREF9189_1859+
864570.HMPREF9189_1218+
864570.HMPREF9189_0071+
864570.HMPREF9189_1111+
864570.HMPREF9189_1118(PF05257)
864570.HMPREF9189_0868(PF01633)
864570.HMPREF9189_1203+
864570.HMPREF9189_0949+
864570.HMPREF9189_0423+
864570.HMPREF9189_1059+
864570.HMPREF9189_1682+
864570.HMPREF9189_1310+
864570.HMPREF9189_0361+
864570.HMPREF9189_1419PF02916
864570.HMPREF9189_1071+
864570.HMPREF9189_1526+
864570.HMPREF9189_1521+
864570.HMPREF9189_0124+
864570.HMPREF9189_1663+
864570.HMPREF9189_1797+
864570.HMPREF9189_1880+
864570.HMPREF9189_1558+
864570.HMPREF9189_0334+
864570.HMPREF9189_0205+
864570.HMPREF9189_1563+
864570.HMPREF9189_1565+
864570.HMPREF9189_1818+
864570.HMPREF9189_1819+
864570.HMPREF9189_1504+
864570.HMPREF9189_0744+
864570.HMPREF9189_0911+
864570.HMPREF9189_0915+
864570.HMPREF9189_1356+
864570.HMPREF9189_0356+
864570.HMPREF9189_0002+not used
864570.HMPREF9189_0009+
864570.HMPREF9189_1744+
864570.HMPREF9189_0583+
864570.HMPREF9189_0900(PF05495)
864570.HMPREF9189_1166(PF01633)
864570.HMPREF9189_1160+
864570.HMPREF9189_0765(PF14311)
864570.HMPREF9189_1368+
864570.HMPREF9189_0981+
864570.HMPREF9189_0625+
864570.HMPREF9189_1765+
864570.HMPREF9189_1613+
864570.HMPREF9189_0565(PF04991)
864570.HMPREF9189_0566(PF04991)
864570.HMPREF9189_0964+
864570.HMPREF9189_1544+
864570.HMPREF9189_0369+
864570.HMPREF9189_0367+
864570.HMPREF9189_0034+
864570.HMPREF9189_1600+
864570.HMPREF9189_1399+
864570.HMPREF9189_0339+
864570.HMPREF9189_0731+

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: YES (FDR = 7.2 %)
    Estimated copy number = 0 (0/0 KEGG proteins)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================