Metamenu

Effective results for Muricauda ruestringensis DSM 13258 (eggnog40)

Summary

Number of putative secreted proteins: 69
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 23 eukaryotic-like domains, contained in 69 proteins (2 high, 67 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
886377.Murru_2402(PF10988)ER
886377.Murru_3206(PF04253)ER
886377.Murru_1528(PF06439)ER
886377.Murru_2428(PF15071)ER
886377.Murru_2516(PF14329)ER
886377.Murru_3005(PF14329)ER
886377.Murru_3308(PF06439)ER
886377.Murru_3343(PF06439)ER
886377.Murru_1858(PF10988)ER
886377.Murru_0194(PF13415)ER
886377.Murru_0848(PF15902)ER
886377.Murru_0591(PF06439)ER
886377.Murru_1527(PF06439)ER
886377.Murru_1414(PF15902)ER
886377.Murru_1415(PF15902)ER
886377.Murru_1413(PF06439)ER
886377.Murru_2765(PF06439)ER
886377.Murru_0546(PF13964)ER
886377.Murru_0956(PF07593)ER
886377.Murru_0954(PF07593)ER
886377.Murru_0955(PF07593)ER
886377.Murru_0556(PF07593)ER
886377.Murru_0565(PF07593)ER
886377.Murru_0150(PF10988)ER
886377.Murru_0151(PF10988)ER
886377.Murru_2486(PF16313)ER
886377.Murru_2713(PF14329)ER
886377.Murru_1625(PF15902)ER
886377.Murru_1978(PF10988)ER
886377.Murru_1970(PF10988)(ER)
886377.Murru_3265(PF00028)ER
886377.Murru_1562(PF15902)ER
886377.Murru_2580(PF16313)ER
886377.Murru_3271(PF00028)ER
886377.Murru_0178(PF15902)ER
886377.Murru_2523(PF15780)ER
886377.Murru_1351(PF03321)mitochondrial
886377.Murru_2996(PF16313)ER
886377.Murru_3468(PF00028)ER
886377.Murru_1913(PF03321)(ER)
886377.Murru_2056(PF16561)ER
886377.Murru_2309(PF11721)ER; (ER)
886377.Murru_2521(PF15780)ER
886377.Murru_3307(PF06439)ER
886377.Murru_0786(PF16313)ER
886377.Murru_1316(PF10988)ER
886377.Murru_2141(PF01541)(mitochondrial)
886377.Murru_1359(PF09834)(mitochondrial)
886377.Murru_2329(PF13964) (PF11721)
886377.Murru_2332(PF11721)
886377.Murru_1864(PF01541)
886377.Murru_0909(PF03321)
886377.Murru_0615(PF01541)
886377.Murru_0583(PF13287)
886377.Murru_1933(PF16561)
886377.Murru_2998(PF01541)
886377.Murru_2282(PF07593)
886377.Murru_0122(PF07766)
886377.Murru_1234(PF01541)
886377.Murru_0543(PF13287)
886377.Murru_1957(PF09834)
886377.Murru_0563(PF06439)
886377.Murru_1117(PF01541)
886377.Murru_1757PF12873
886377.Murru_3449(PF01541)
886377.Murru_3189(PF13910)
886377.Murru_2737(PF13875)
886377.Murru_0340PF09258
886377.Murru_1904(PF01541)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: NO (FDR = 12.5 %)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: NO (FDR = 7.7 %)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================