Metamenu

Effective results for Fructobacillus fructosus KCTC 3544 (eggnog40)

Summary

Number of putative secreted proteins: 11
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 6 eukaryotic-like domains, contained in 11 proteins (0 high, 11 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
930946.FfruK3_010100003995(PF12949)mitochondrial
930946.FfruK3_010100002820(PF03596)ER
930946.FfruK3_010100001267(PF03596)(ER)
930946.FfruK3_010100004974(PF01741)(mitochondrial)
930946.FfruK3_010100003385(PF00194)
930946.FfruK3_010100004939(PF06421)
930946.FfruK3_010100003720(PF01741)
930946.FfruK3_010100003290(PF01741)
930946.FfruK3_010100003390(PF00194)
930946.FfruK3_010100002201(PF05495)
930946.FfruK3_010100004315(PF06421)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================