Metamenu

Effective results for Melissococcus plutonius ATCC 35311 (eggnog40)

Summary

Number of putative secreted proteins: 18
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 9 eukaryotic-like domains, contained in 18 proteins (0 high, 18 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): None

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
940190.MPTP_0462(PF03894)(mitochondrial)
940190.MPTP_0387(PF06100)(mitochondrial)
940190.MPTP_1016(PF09364) (PF03894)
940190.MPTP_0357(PF14683) (PF14686)
940190.MPTP_0824(PF05704)(mitochondrial)
940190.MPTP_0461(PF03894) (PF09364)
940190.MPTP_1648(PF00204)
940190.MPTP_0825(PF05704)
940190.MPTP_0031(PF00165)
940190.MPTP_0026(PF14587)
940190.MPTP_0025(PF14587)
940190.MPTP_0005(PF00204)
940190.MPTP_0006(PF00204)
940190.MPTP_0460(PF09364)
940190.MPTP_0386(PF06100)
940190.MPTP_0388(PF06100)
940190.MPTP_1113(PF00204)
940190.MPTP_1754(PF14683)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: NO (FDR = 0.5 %)
  • Functional Type III secretion system: N.D.
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: N.D.

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================