Metamenu

Effective results for Vibrio sinaloensis DSM 21326 (eggnog40)

Summary

Number of putative secreted proteins: 645
- Predicted by EffectiveT3: 197 (high confidence), 319 (low confidence)
- Predicted by EffectiveCCBD: 32 within, 27 before, 63 behind expected region 25..70aa
- Predicted by T4SEpre: 0
- Predicted by EffectiveELD: 17 eukaryotic-like domains, contained in 24 proteins (2 high, 22 medium Z-score)
Predicted protein secretion systems (parentheses indicate weak positive predictions lacking more than 50% of core proteins of a secretion system): (Type III), Type VI

Protein based results

Putative secreted proteins (weak evidence indicated by parentheses)

ProteinEffectiveT3EffectiveCCBDT4SEpreEffectiveELDPredotar
945550.VISI1226_15928+(PF01117)ER
945550.VISI1226_16970+(mitochondrial)
945550.VISI1226_18864+ER
945550.VISI1226_22445+ER
945550.VISI1226_04724(>)ER
945550.VISI1226_02542(>)ER
945550.VISI1226_00960(>)ER
945550.VISI1226_16693+(mitochondrial)
945550.VISI1226_01495+(ER); ER
945550.VISI1226_08294+(ER)
945550.VISI1226_11431(PF14248)ER
945550.VISI1226_06723+(ER)
945550.VISI1226_14911(>)ER
945550.VISI1226_19269+(mitochondrial); mitochondrial
945550.VISI1226_03315PF13859ER
945550.VISI1226_13863(PF08180)ER
945550.VISI1226_18311+(ER)
945550.VISI1226_14298+(mitochondrial); mitochondrial
945550.VISI1226_16723(>)ER
945550.VISI1226_15958(PF02010)ER
945550.VISI1226_09834(>)(mitochondrial)
945550.VISI1226_10079(PF14248)ER
945550.VISI1226_10617(PF00031)ER
945550.VISI1226_01285PF05405ER
945550.VISI1226_08379(>)ER
945550.VISI1226_07667(<)mitochondrial; (mitochondrial)
945550.VISI1226_11017+ER
945550.VISI1226_21184(>)ER
945550.VISI1226_10129+ER
945550.VISI1226_12696+(ER)
945550.VISI1226_17971+(ER)
945550.VISI1226_12361(PF17186)ER
945550.VISI1226_05618+(ER)
945550.VISI1226_20475(>)ER
945550.VISI1226_14303(PF17186)ER
945550.VISI1226_12096(>)ER
945550.VISI1226_17315(<)ER
945550.VISI1226_15526(>)ER
945550.VISI1226_12511+ER
945550.VISI1226_10797(PF06468)ER
945550.VISI1226_10792(PF06468)ER
945550.VISI1226_20630+ER
945550.VISI1226_17740(PF10462)ER
945550.VISI1226_22545+ER; (ER)
945550.VISI1226_18506+ER
945550.VISI1226_18236(>)ER
945550.VISI1226_10687(<)ER
945550.VISI1226_13086(<)ER
945550.VISI1226_16583+ER
945550.VISI1226_08614(>)ER
945550.VISI1226_21299+ER
945550.VISI1226_09324(>)ER
945550.VISI1226_07153+ER
945550.VISI1226_19424+ER
945550.VISI1226_02100(>)ER
945550.VISI1226_03505+ER
945550.VISI1226_14611(>)ER
945550.VISI1226_18884+ER; (ER)
945550.VISI1226_16018+ER
945550.VISI1226_21749+ER
945550.VISI1226_15591+(mitochondrial); (plastid)
945550.VISI1226_21634(>)ER
945550.VISI1226_02882(>)ER
945550.VISI1226_13046(>)ER
945550.VISI1226_08934+(ER)
945550.VISI1226_05713+(plastid)
945550.VISI1226_09754+(plastid)
945550.VISI1226_15146(+)(ER); ER
945550.VISI1226_14881(+)(ER)
945550.VISI1226_01035(+)ER
945550.VISI1226_03750+(ER)
945550.VISI1226_11389+plastid
945550.VISI1226_12206+(plastid)
945550.VISI1226_16518+(plastid)
945550.VISI1226_20949(+)(ER)
945550.VISI1226_15381(+)(mitochondrial); (plastid)
945550.VISI1226_18921(+)ER
945550.VISI1226_06403(+)(mitochondrial); mitochondrial
945550.VISI1226_00710(+)ER
945550.VISI1226_15411(+)ER
945550.VISI1226_19339(+)ER; (ER)
945550.VISI1226_22757(>)(mitochondrial)
945550.VISI1226_10627(+)ER
945550.VISI1226_00455+(mitochondrial)
945550.VISI1226_01980(>)(plastid)
945550.VISI1226_05371+(plastid)
945550.VISI1226_01675(+)(mitochondrial)
945550.VISI1226_14347+(ER)
945550.VISI1226_05019(+)ER
945550.VISI1226_13693+(plastid)
945550.VISI1226_01240(+)(mitochondrial)
945550.VISI1226_14128(+)ER
945550.VISI1226_20580+(>)
945550.VISI1226_03650(+)mitochondrial; (mitochondrial)
945550.VISI1226_21099(+)ER
945550.VISI1226_13683++
945550.VISI1226_03064+(mitochondrial)
945550.VISI1226_20131(+)ER
945550.VISI1226_13161+(>)
945550.VISI1226_00250+(mitochondrial)
945550.VISI1226_15221+(ER)
945550.VISI1226_09419(+)(mitochondrial)
945550.VISI1226_13948++
945550.VISI1226_00665+(PF07653)
945550.VISI1226_13636+(mitochondrial)
945550.VISI1226_09644(+)ER
945550.VISI1226_01795+(ER)
945550.VISI1226_23042(+)(mitochondrial); (ER)
945550.VISI1226_06318(+)mitochondrial; (mitochondrial)
945550.VISI1226_16108(+)ER
945550.VISI1226_01690(+)(ER)
945550.VISI1226_22055(+)mitochondrial; (mitochondrial)
945550.VISI1226_05416+(plastid)
945550.VISI1226_11961(PF13718)(mitochondrial)
945550.VISI1226_20954(+)mitochondrial; (mitochondrial)
945550.VISI1226_11561+plastid
945550.VISI1226_01915(+)ER; (ER)
945550.VISI1226_05376+plastid
945550.VISI1226_04799+(PF10014)
945550.VISI1226_15581(+)(mitochondrial)
945550.VISI1226_04984+(ER)
945550.VISI1226_05451+(plastid)
945550.VISI1226_03180(+)(ER)
945550.VISI1226_11384+plastid
945550.VISI1226_01580+(plastid)
945550.VISI1226_13196(+)ER
945550.VISI1226_04215+(>)
945550.VISI1226_11344+
945550.VISI1226_04994(+)(>)
945550.VISI1226_20994+
945550.VISI1226_20999(<)
945550.VISI1226_03535+
945550.VISI1226_10239+
945550.VISI1226_00750+
945550.VISI1226_17710+
945550.VISI1226_01370+
945550.VISI1226_13673+
945550.VISI1226_08409+
945550.VISI1226_13121(+)(plastid)
945550.VISI1226_01155+
945550.VISI1226_14596+
945550.VISI1226_21866+
945550.VISI1226_17250+
945550.VISI1226_22200+
945550.VISI1226_15631+
945550.VISI1226_08624+
945550.VISI1226_10204(>)
945550.VISI1226_10717(<)
945550.VISI1226_10887+
945550.VISI1226_10882+
945550.VISI1226_07248(<)
945550.VISI1226_07243(PF06042)
945550.VISI1226_01360(>)
945550.VISI1226_16523+
945550.VISI1226_16148+
945550.VISI1226_16143+
945550.VISI1226_21129+
945550.VISI1226_12716+
945550.VISI1226_21304+
945550.VISI1226_12536+
945550.VISI1226_22275(<)
945550.VISI1226_05249+
945550.VISI1226_04869(PF10013)not used
945550.VISI1226_20545(<)not used
945550.VISI1226_08769+
945550.VISI1226_19976+not used
945550.VISI1226_05733+
945550.VISI1226_02130+
945550.VISI1226_20685+
945550.VISI1226_02587+
945550.VISI1226_03600+
945550.VISI1226_06728+
945550.VISI1226_03395+
945550.VISI1226_17480+
945550.VISI1226_08514(PF06042)
945550.VISI1226_07418+
945550.VISI1226_16608+
945550.VISI1226_13476(>)
945550.VISI1226_08429+
945550.VISI1226_00390+
945550.VISI1226_05119(<)
945550.VISI1226_12836(+)(plastid)
945550.VISI1226_21069(+)(mitochondrial)
945550.VISI1226_13723+
945550.VISI1226_22902+
945550.VISI1226_12526+
945550.VISI1226_07073(>)
945550.VISI1226_04679(>)
945550.VISI1226_15361+
945550.VISI1226_08999(>)
945550.VISI1226_22080(>)
945550.VISI1226_02637(<)
945550.VISI1226_22887+
945550.VISI1226_06608+
945550.VISI1226_20230+
945550.VISI1226_11426+
945550.VISI1226_11941+
945550.VISI1226_09829+
945550.VISI1226_14761+
945550.VISI1226_05386+
945550.VISI1226_20784+not used
945550.VISI1226_06428(<)
945550.VISI1226_07398(+)(mitochondrial)
945550.VISI1226_16533+
945550.VISI1226_13466(>)
945550.VISI1226_16188+
945550.VISI1226_13643(<)not used
945550.VISI1226_06368+
945550.VISI1226_21219+
945550.VISI1226_15556+
945550.VISI1226_00620+
945550.VISI1226_12286+
945550.VISI1226_04245+
945550.VISI1226_07832+
945550.VISI1226_15391(>)
945550.VISI1226_04669+
945550.VISI1226_14048+
945550.VISI1226_23127(<)
945550.VISI1226_08854+
945550.VISI1226_02400(<)not used
945550.VISI1226_11671(>)
945550.VISI1226_14936(>)not used
945550.VISI1226_00005(PF16184)
945550.VISI1226_01530+
945550.VISI1226_17040+
945550.VISI1226_13356(+)(ER)
945550.VISI1226_12726+
945550.VISI1226_22625(+)+
945550.VISI1226_18951+
945550.VISI1226_23202+
945550.VISI1226_04502(+)(mitochondrial)
945550.VISI1226_04899+
945550.VISI1226_02160+
945550.VISI1226_14442+
945550.VISI1226_10597(>)
945550.VISI1226_03585+
945550.VISI1226_17450+
945550.VISI1226_13933+
945550.VISI1226_03039(<)
945550.VISI1226_00105+
945550.VISI1226_01850(>)
945550.VISI1226_16098+
945550.VISI1226_18631(+)(plastid)
945550.VISI1226_04085+
945550.VISI1226_04130+
945550.VISI1226_04350+
945550.VISI1226_22345(+)(PF10014)
945550.VISI1226_05354+not used
945550.VISI1226_09634+
945550.VISI1226_05194+
945550.VISI1226_06898+
945550.VISI1226_09529(+)(ER)
945550.VISI1226_20480+
945550.VISI1226_03915+not used
945550.VISI1226_20245(+)(>)
945550.VISI1226_06478+
945550.VISI1226_21449(+)(ER)
945550.VISI1226_03139(>)
945550.VISI1226_17115+
945550.VISI1226_01860(>)
945550.VISI1226_13763+
945550.VISI1226_19254+
945550.VISI1226_08489(+)(mitochondrial)
945550.VISI1226_15691+
945550.VISI1226_15993(>)
945550.VISI1226_02742(>)
945550.VISI1226_07303(+)(<)
945550.VISI1226_20615+
945550.VISI1226_09869+
945550.VISI1226_06513+
945550.VISI1226_02837+
945550.VISI1226_21014+
945550.VISI1226_16258+
945550.VISI1226_08819+
945550.VISI1226_21439(>)
945550.VISI1226_12556+
945550.VISI1226_22165(+)plastid
945550.VISI1226_14387+
945550.VISI1226_19369+
945550.VISI1226_01005+
945550.VISI1226_04754+
945550.VISI1226_11214(+)(ER)
945550.VISI1226_05406+
945550.VISI1226_19761+
945550.VISI1226_03330+
945550.VISI1226_07582+
945550.VISI1226_00685(>)
945550.VISI1226_03795(+)(plastid)
945550.VISI1226_17310+
945550.VISI1226_17260+
945550.VISI1226_19092+
945550.VISI1226_21394+
945550.VISI1226_19806(>)
945550.VISI1226_15831(>)
945550.VISI1226_01225+
945550.VISI1226_11209+
945550.VISI1226_18681+
945550.VISI1226_09319+
945550.VISI1226_13973(PF16184)not used
945550.VISI1226_20705+not used
945550.VISI1226_15256+
945550.VISI1226_10314+
945550.VISI1226_08167+
945550.VISI1226_03785+
945550.VISI1226_02817(<)
945550.VISI1226_01415+
945550.VISI1226_15331(+)(plastid)
945550.VISI1226_07358+
945550.VISI1226_00320+
945550.VISI1226_07872(+)(>)
945550.VISI1226_09614+
945550.VISI1226_04959+
945550.VISI1226_05426(+)plastid
945550.VISI1226_19746+
945550.VISI1226_06059(+)(plastid)
945550.VISI1226_08574+
945550.VISI1226_11304+
945550.VISI1226_23197(+)(<)
945550.VISI1226_20620+
945550.VISI1226_06234+
945550.VISI1226_17620(>)
945550.VISI1226_21019+
945550.VISI1226_05441(>)
945550.VISI1226_00405(PF08732)
945550.VISI1226_13416+
945550.VISI1226_13411+
945550.VISI1226_13526+
945550.VISI1226_12856+
945550.VISI1226_15236+
945550.VISI1226_00335+
945550.VISI1226_23122(+)(mitochondrial)
945550.VISI1226_05309+
945550.VISI1226_08844+
945550.VISI1226_05234+
945550.VISI1226_08849+
945550.VISI1226_11314(>)
945550.VISI1226_02010(>)
945550.VISI1226_09429(>)
945550.VISI1226_11826+
945550.VISI1226_06049+
945550.VISI1226_20919+
945550.VISI1226_03875(<)
945550.VISI1226_03275+
945550.VISI1226_17435+
945550.VISI1226_04527+
945550.VISI1226_17380+
945550.VISI1226_13888+
945550.VISI1226_07972(+)(ER)
945550.VISI1226_07373+
945550.VISI1226_16743+
945550.VISI1226_20215+
945550.VISI1226_21349(>)
945550.VISI1226_21294(+)(plastid)
945550.VISI1226_22520(+)(mitochondrial)
945550.VISI1226_11369(>)
945550.VISI1226_19439+
945550.VISI1226_11966(PF13718)
945550.VISI1226_11811+
945550.VISI1226_05905+
945550.VISI1226_08257+
945550.VISI1226_17285(<)
945550.VISI1226_00515+
945550.VISI1226_12906(+)(mitochondrial)
945550.VISI1226_13883+
945550.VISI1226_16940+
945550.VISI1226_17976(+)(ER)
945550.VISI1226_18889(<)not used
945550.VISI1226_08262+
945550.VISI1226_21554+
945550.VISI1226_11374+
945550.VISI1226_18461(<)
945550.VISI1226_11379(+)(plastid)
945550.VISI1226_09139(<)
945550.VISI1226_10514+
945550.VISI1226_11586(>)
945550.VISI1226_11581(>)
945550.VISI1226_21955(>)
945550.VISI1226_20200(<)
945550.VISI1226_03435+
945550.VISI1226_07228(<)
945550.VISI1226_16543(>)
945550.VISI1226_21104(>)
945550.VISI1226_22997(+)+
945550.VISI1226_15601(>)
945550.VISI1226_22455+
945550.VISI1226_22697(<)
945550.VISI1226_15736(>)
945550.VISI1226_03550(+)(mitochondrial)
945550.VISI1226_05009(+)
945550.VISI1226_19414(+)
945550.VISI1226_19419(+)
945550.VISI1226_03885(+)
945550.VISI1226_20570(+)
945550.VISI1226_13853(+)
945550.VISI1226_03155(+)not used
945550.VISI1226_10657(+)
945550.VISI1226_16713(+)
945550.VISI1226_01575(+)
945550.VISI1226_13071(+)
945550.VISI1226_08157(+)
945550.VISI1226_12686(+)
945550.VISI1226_08404(+)
945550.VISI1226_21489(+)
945550.VISI1226_00070(+)
945550.VISI1226_22405(+)
945550.VISI1226_07488(+)
945550.VISI1226_12496(+)
945550.VISI1226_22842(+)
945550.VISI1226_19399(+)
945550.VISI1226_09204(+)
945550.VISI1226_22065(+)
945550.VISI1226_20500(+)
945550.VISI1226_04552(+)
945550.VISI1226_10089(+)
945550.VISI1226_17545(+)not used
945550.VISI1226_16233(+)
945550.VISI1226_01815(+)not used
945550.VISI1226_22912(+)
945550.VISI1226_03220(+)
945550.VISI1226_21494(+)
945550.VISI1226_12711(+)
945550.VISI1226_15841(+)
945550.VISI1226_12621(+)
945550.VISI1226_18874(+)
945550.VISI1226_05833(+)
945550.VISI1226_21309(+)
945550.VISI1226_19274(+)
945550.VISI1226_22877(+)
945550.VISI1226_15621(+)
945550.VISI1226_09749(+)
945550.VISI1226_18456(+)
945550.VISI1226_08764(+)
945550.VISI1226_09964(+)
945550.VISI1226_03170(+)
945550.VISI1226_06433(+)
945550.VISI1226_07522(+)
945550.VISI1226_01820(+)
945550.VISI1226_16603(+)not used
945550.VISI1226_13471(+)
945550.VISI1226_22460(+)
945550.VISI1226_15531(+)
945550.VISI1226_18601(+)
945550.VISI1226_05381(+)
945550.VISI1226_04380(+)
945550.VISI1226_08354(+)
945550.VISI1226_01040(+)
945550.VISI1226_14576(+)
945550.VISI1226_02095(+)
945550.VISI1226_06034(+)not used
945550.VISI1226_20525(+)
945550.VISI1226_09359(+)not used
945550.VISI1226_01545(+)
945550.VISI1226_03760(+)
945550.VISI1226_16618(+)
945550.VISI1226_01830(+)
945550.VISI1226_07662(+)
945550.VISI1226_19674(+)
945550.VISI1226_14731(+)
945550.VISI1226_19214(+)
945550.VISI1226_22250(+)
945550.VISI1226_22747(+)not used
945550.VISI1226_09544(+)
945550.VISI1226_09389(+)
945550.VISI1226_10474(+)
945550.VISI1226_06633(+)
945550.VISI1226_02405(+)
945550.VISI1226_20220(+)
945550.VISI1226_17225(+)
945550.VISI1226_20520(+)
945550.VISI1226_00130(+)
945550.VISI1226_01665(+)
945550.VISI1226_01060(+)
945550.VISI1226_04834(+)
945550.VISI1226_23112(+)
945550.VISI1226_09154(+)
945550.VISI1226_05743(+)
945550.VISI1226_03360(+)
945550.VISI1226_14328(+)not used
945550.VISI1226_14323(+)
945550.VISI1226_07712(+)
945550.VISI1226_11394(+)
945550.VISI1226_16278(+)
945550.VISI1226_00855(+)
945550.VISI1226_03630(+)
945550.VISI1226_19062(+)
945550.VISI1226_15576(+)
945550.VISI1226_04642(+)
945550.VISI1226_09149(+)
945550.VISI1226_09639(+)
945550.VISI1226_08729(+)
945550.VISI1226_05179(+)
945550.VISI1226_18496(+)
945550.VISI1226_19549(+)
945550.VISI1226_10064(+)
945550.VISI1226_11052(+)
945550.VISI1226_14641(+)not used
945550.VISI1226_14318(+)
945550.VISI1226_09504(+)
945550.VISI1226_00115(+)
945550.VISI1226_12186(+)
945550.VISI1226_22670(+)
945550.VISI1226_13581(+)
945550.VISI1226_08559(+)
945550.VISI1226_16333(+)
945550.VISI1226_21429(+)
945550.VISI1226_00200(+)
945550.VISI1226_22515(+)
945550.VISI1226_10822(+)not used
945550.VISI1226_18151(+)
945550.VISI1226_08804(+)
945550.VISI1226_22777(+)
945550.VISI1226_08734(+)
945550.VISI1226_08939(+)
945550.VISI1226_09199(+)
945550.VISI1226_05763(+)
945550.VISI1226_06463(+)
945550.VISI1226_16203(+)
945550.VISI1226_17090(+)
945550.VISI1226_12771(+)
945550.VISI1226_12796(+)
945550.VISI1226_19961(+)
945550.VISI1226_18786(+)
945550.VISI1226_04375(+)
945550.VISI1226_08834(+)
945550.VISI1226_19564(+)
945550.VISI1226_22010(+)
945550.VISI1226_18966(+)
945550.VISI1226_08057(+)
945550.VISI1226_11329(+)
945550.VISI1226_03610(+)
945550.VISI1226_18211(+)
945550.VISI1226_00915(+)
945550.VISI1226_07587(+)not used
945550.VISI1226_14621(+)
945550.VISI1226_10927(+)
945550.VISI1226_05109(+)
945550.VISI1226_03660(+)
945550.VISI1226_00460(+)
945550.VISI1226_16133(+)not used
945550.VISI1226_01315(+)
945550.VISI1226_12766(+)
945550.VISI1226_17861(+)
945550.VISI1226_22170(+)
945550.VISI1226_04060(+)
945550.VISI1226_18776(+)
945550.VISI1226_15786(+)
945550.VISI1226_05366(+)not used
945550.VISI1226_09269(+)
945550.VISI1226_09409(+)
945550.VISI1226_03320(+)
945550.VISI1226_06458(+)not used
945550.VISI1226_07627(+)
945550.VISI1226_14676(+)
945550.VISI1226_12066(+)
945550.VISI1226_03074(+)
945550.VISI1226_17525(+)
945550.VISI1226_17255(+)
945550.VISI1226_07318(+)
945550.VISI1226_01410(+)
945550.VISI1226_16128(+)
945550.VISI1226_03475(+)
945550.VISI1226_00525(+)
945550.VISI1226_00520(+)
945550.VISI1226_00095(+)
945550.VISI1226_08694(+)
945550.VISI1226_19167(+)
945550.VISI1226_15171(+)
945550.VISI1226_14003(+)
945550.VISI1226_22410(+)
945550.VISI1226_08212(+)
945550.VISI1226_05421(+)
945550.VISI1226_23147(+)
945550.VISI1226_02330(+)
945550.VISI1226_20849(+)
945550.VISI1226_10812(+)
945550.VISI1226_17405(+)
945550.VISI1226_07173(+)
945550.VISI1226_16753(+)
945550.VISI1226_15908(+)
945550.VISI1226_12231(+)
945550.VISI1226_22155(+)
945550.VISI1226_05059(+)
945550.VISI1226_02472(+)
945550.VISI1226_09334(+)
945550.VISI1226_13958(+)
945550.VISI1226_20435(+)
945550.VISI1226_06229(+)
945550.VISI1226_20380(+)
945550.VISI1226_14981(+)
945550.VISI1226_10997(+)
945550.VISI1226_01925(+)
945550.VISI1226_03455(+)not used
945550.VISI1226_07203(+)
945550.VISI1226_13626(+)
945550.VISI1226_16363(+)
945550.VISI1226_09659(+)not used
945550.VISI1226_20764(+)
945550.VISI1226_16965(+)
945550.VISI1226_09789(+)
945550.VISI1226_08874(+)
945550.VISI1226_09784(+)
945550.VISI1226_18411(+)
945550.VISI1226_20959(+)
945550.VISI1226_05623(+)
945550.VISI1226_23152(+)
945550.VISI1226_02265(+)
945550.VISI1226_06783(+)
945550.VISI1226_20395(+)
945550.VISI1226_07962(+)
945550.VISI1226_17180(+)
945550.VISI1226_06009(+)
945550.VISI1226_12051(+)
945550.VISI1226_13421(+)
945550.VISI1226_16173(+)
945550.VISI1226_12126(+)
945550.VISI1226_16763(+)
945550.VISI1226_14238(+)
945550.VISI1226_16483(+)
945550.VISI1226_12271(+)
945550.VISI1226_21754(+)
945550.VISI1226_04180(+)
945550.VISI1226_21926(+)
945550.VISI1226_22040(+)
945550.VISI1226_10857(+)
945550.VISI1226_05586(+)
945550.VISI1226_22265(+)not used
945550.VISI1226_11806(+)
945550.VISI1226_20964(+)
945550.VISI1226_06209+
945550.VISI1226_10354(+)
945550.VISI1226_06668(+)
945550.VISI1226_07428(+)
945550.VISI1226_13998(+)
945550.VISI1226_17385(+)
945550.VISI1226_06843(+)
945550.VISI1226_22992(+)
945550.VISI1226_00365(+)
945550.VISI1226_21039(+)
945550.VISI1226_06928(+)
945550.VISI1226_19634(+)
945550.VISI1226_19781(+)
945550.VISI1226_04627(+)
945550.VISI1226_12246(+)
945550.VISI1226_15731(+)
945550.VISI1226_18091(+)

Detailed merged results for each protein sequence

Individual results for each protein sequence

Genome based results

Summary

  • Gram negative: YES (FDR = 0.5 %)
  • Functional Type III secretion system: YES (FDR = 12.5 %)
    Estimated copy number = 0.5 (5/10 KEGG proteins)
  • Functional Type IV secretion system: NO (FDR = 7.2 %)
  • Functional Type VI secretion system: YES (FDR = 7.7 %)
    Estimated copy number = 1.0 (8/8 KEGG proteins)

Individual results for each secretion system

Parameters:

==========================================================
EFFECTIVE_T3_OLD=selective
EFFECTIVE_T3_NEW=selective
PREDOTAR_ANIMAL_OR_PLANT=a
PROTEINS=INPUT PROTEINS
MODUS=genome
RUN_PREDOTAR=T
RUN_EFFECTIVE_T3=T
RUN_T4SEpre=0.5
RUN_EFFECTIVE_CCBD=T
RUN_EFFECTIVE_ELD=4
CheckM_COMPLETENESS=
RUN_EffectiveS346=T
GENOTYPE=COG Profile
EMAIL=
==========================================================