New release 5.0 of Eukaryotic-like domains finished

F-Box domain

The eukaryotic-like domains of our EffectiveELD method have been updated. The new release 5.0 is based on an updated genome repository including all bacterial genomes from the RefSeq database.

Protein domains have been annotated using Interproscan 53.0 based on PFAM 28.0.

The host associations of these genome have been obtained from the NCBI list of microbial genomes, Genomes OnLine Database and BACMAP.

EffectiveELD 5.0 contains 9004 eukaryotic domains, of which 2535 have been found enriched (Z-score >=4) in at least one genome of a pathogen or symbiont.